| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_05105 |
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| Symbol | |
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| ID | 9296513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | + |
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| Start bp | 1159083 |
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| End bp | 1160519 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | |
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| Product | alpha-amylase, putative |
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| Protein accession | YP_003715785 |
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| Protein GI | 298207606 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.289074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT ATATTTCAGC TTTACTAATA GGACTTGCGT TTGTAGCGTG TAAGTCAGAG
CCTAAACAAG AAGAGGTGAC AGTAGAAACT CCTAAAGAGA TTGCGCCAGT TAATGATGAA
ATGCTGGAAA CAGCAATTAT CTATGAGGCT AACATAAGAC AGTATTCTAA TGAAGGTACT
TTTAACGCCT TTACGAAAGA CATTCCTGAG CTAAAGCAAT TGGGTGTAAA AGTAATTTGG
TTAATGCCAA TATTTCCTAT TTCAGAAACT AAACGTAAAG CTACTGGAGG CGATTTTGCA
AGCCTTATTG AAGATGAGGC AGAGCGTGAA AAAATGTTAG GTAGTTATTA TGCTGTTTCA
GATTTTACAG AGGTAAATCC AGAGTTTGGT ACCAAAGAAG ATTTTAGAGC ACTTCTTAAA
ACGGCACATG ATAATGATAT GTATGTAATT TTAGACTGGG TGCCAAACCA TACAGGTTGG
GATCACGTTT GGATAAAAAA TCATCCAGAA TTTTATACTA AAAACGCTAA AGGAGAAATT
ACAGATCCAT TAAACGAAGA TGGAGAGCCA GTTGGTTGGG CAGATGTTGC AGACCTAGAT
TACAGTAATG AGAACTTACG TAACGAAATG ATTTCAGATA TGAAATATTG GTTGTCCGAA
GAAGGTGTAG ATGGCTTTAG ATGTGATGTT GCTGGTAGTG TACCATTAGA TTTTTGGGAG
CAAGCTATAC CACAACTTCG TGATACTAAA GATGTATTTA TGTTAGCTGA AGCTTGGGAG
CCAGAATTAT TAAAAGCTAA TTTATTTGAT ATGGCTTACG CTTGGGATGG TCATCATATG
ATGAACGCAA TTGCATCTGG AGAAAAGGAT GCGTCTGCTT TTAAAGACTA CATATCTAAA
GTTGAAACCG ACTACGAAGA CAATGACATC TTAATGAATT TTGTAACAAA CCACGACGAA
AACTCTTGGA ATGGAACTAT TAAGGAGCGT ATGGGTTCTA ATGCAAGTGC AATGACAGCG
TTGTCATACA CAATGCCTGG AATGCCACTA ATTTATAGTG GTCAAGAATA CGATCTAGAT
CACAGGTTAA AGTTTTTTGA AAAGGATAGT ATACCAAAAA CAAAAGCTAA TATGTGGCCA
TTGTTAGAAA AATTAGGGCA ACTTAAGACA GAAAACAAAG CGCTTCATGG AGGTAAAGAT
GCTGCAACAA TATCTATTTT AGAAACATCT AAGCCAAATG CTATCATTGC TTTTAAAAGA
GAGAAAGCAG AAGATCAATT GGTATATTTA GCAAATGTAT CTAATAACCC AATTACATTT
ACTGTACAAT TAGAAGGTGT ATATGTAGAT GAAATGACAG GAAAAGAAAT TACGCTAGCT
AAAGATCAGG AACACACATT AAAAGGAAAT CAATACGTTA TATATACCAA TAAATAA
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| Protein sequence | MKTYISALLI GLAFVACKSE PKQEEVTVET PKEIAPVNDE MLETAIIYEA NIRQYSNEGT
FNAFTKDIPE LKQLGVKVIW LMPIFPISET KRKATGGDFA SLIEDEAERE KMLGSYYAVS
DFTEVNPEFG TKEDFRALLK TAHDNDMYVI LDWVPNHTGW DHVWIKNHPE FYTKNAKGEI
TDPLNEDGEP VGWADVADLD YSNENLRNEM ISDMKYWLSE EGVDGFRCDV AGSVPLDFWE
QAIPQLRDTK DVFMLAEAWE PELLKANLFD MAYAWDGHHM MNAIASGEKD ASAFKDYISK
VETDYEDNDI LMNFVTNHDE NSWNGTIKER MGSNASAMTA LSYTMPGMPL IYSGQEYDLD
HRLKFFEKDS IPKTKANMWP LLEKLGQLKT ENKALHGGKD AATISILETS KPNAIIAFKR
EKAEDQLVYL ANVSNNPITF TVQLEGVYVD EMTGKEITLA KDQEHTLKGN QYVIYTNK
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