Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_04845 |
Symbol | |
ID | 9296459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | + |
Start bp | 1100523 |
End bp | 1101629 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | oligopeptide ABC transporter permease |
Protein accession | YP_003715733 |
Protein GI | 298207554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.279335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACG CCAATTCATT ATCTCAACTC GCGCTCCAAA AATTTAAAAA AAACTTTTGG GGCGTTTTGA GTTTCTGGTT TGTTGTCTTG GGAGTATTAC TTGCAATATT TGCTTATGCA TTAGCACCAG ATAATTCTCA AAATGCTAAT CAACAACATA TTTCAATTCA CTCTAAGAAG CCAGGATTTA AGGCTACTAT TCTTACCATA CCATCAAAAT TAGAGCAAGA ACAATCTTTT TTGGATAAAC TCTTATTTGG TAAGGAAGAC AATTCTACAG AGTTACCTAT TGTAGATTAT AAGTTTGAGG GAGAATCAAT AATTGTAACA CCTTATACAG ATGAAAGCAT TAAAGGTTTG CCTAAAACCT ATTCTTTTGC ATCTTTTCCC AAAGGCTTAA CTAAAACCGA AATCGAATCT CAATTTATAA ATGAACAAAC ATTTTTATTA GGAACAGATA AGTATGGTAG AGATTTACTA AGCAGAATGC TAGTAGGTAT TCGTATTTCA CTATCTATTG GTTTTGTAGC AGTATTTATC TCGTTGTTAA TAGGAATAAG TTTGGGAGCA CTTGCAGGGT TTTACGGTGG TAAGATAGAT GCAGCTATCA TGTGGCTTAT AAATGTAACG TGGTCTATAC CTACTTTACT ATTAGTAATA GCCATTACAT TGGCTTTAGG TAAGGGATTT TGGCAAGTGT TTATTGCAGT AGGTTTAACT ATGTGGGTAG AGGTTGCAAG AGTTGTTCGT GGCCAAGTAA TGAGCGTAAA AAATATGCAA TATGTAACTG CAGCACGTGC TTTAGGTTTT ACAAATGGTA GAATAATTGT AAAACACATC TTACCAAATA TTTTAGCACC AGTAATTGTA ATCTCTGCAG CTAATTTTGC TGCTGCAATA TTAATTGAAA GTGGTCTTAG TTTTTTAGGT ATAGGAGCAC AACCTCCAAT GCCAAGTTGG GGAGCAATGA TAAAAGACCA TTACAGTTAT ATAATTTTAG GTAAAGCTTA CCTGGCAATT ATACCTGGCT TGGGTATAAT GAGCTTAGTA ATGGCATTTA TGCTAATAGG TAACGCTCTT AGAGATGCGT TAGACGTTAA GAGTTAA
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Protein sequence | MANANSLSQL ALQKFKKNFW GVLSFWFVVL GVLLAIFAYA LAPDNSQNAN QQHISIHSKK PGFKATILTI PSKLEQEQSF LDKLLFGKED NSTELPIVDY KFEGESIIVT PYTDESIKGL PKTYSFASFP KGLTKTEIES QFINEQTFLL GTDKYGRDLL SRMLVGIRIS LSIGFVAVFI SLLIGISLGA LAGFYGGKID AAIMWLINVT WSIPTLLLVI AITLALGKGF WQVFIAVGLT MWVEVARVVR GQVMSVKNMQ YVTAARALGF TNGRIIVKHI LPNILAPVIV ISAANFAAAI LIESGLSFLG IGAQPPMPSW GAMIKDHYSY IILGKAYLAI IPGLGIMSLV MAFMLIGNAL RDALDVKS
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