Gene CA2559_01130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_01130 
Symbol 
ID9295709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp279731 
End bp280975 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content35% 
IMG OID 
Productputative ABC transporter 
Protein accessionYP_003714992 
Protein GI298206813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.95272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATA TTGAACGTTG GCAAGAAATA TTTCAAACAA TAGCAAAAAA TAAACTCCGT 
ACGTTTTTAA CAGGAGTATC TGTAGCGTCT GGTATTTTCA TCTTAGTTAT TCTTCTAGGT
TTTGGCCAAG GCATGGAAAA TGGAATTTCT AAAGAGTTTC AAAATGATGC TTCTAATAGA
ATAAGTGTTT GGTCTGGAGT TACTACTGTG GAGCATAAAG GACTAAATCC TGGTCGCTTC
ATACAGATGA AGAATAAAGA TTTTGAATTC ATCACCAAGA AGTATTCAGA TAAAATTGAA
AACAAATCAT CGCTTTATAG AATTTGGAAT GGTCTCGCAA CTCATGGCAA AGAAAGTGGT
AGTTACCGCG TTGAAGGTGT ACATCCAGAT TACCAATTCT TAGAAAATGA AACTTTAACA
GCGGGAAGAT ATCTTAACCA AAATGATATA GATCATAACG AAAAAGTTGT GGTGCTAGGT
CATAAAGTTA AACGCGATCT TTTTAAAGAA GAAGATGCAA TTGGAAAACA ATTACAAGTT
TCAGGTGTAA ACTTTAAAGT TGTAGGTGTG TATACAGATC CTGGCGGAGA ACGTGAAGAA
GCTCGTATCT TTTTACCAAT TACGACTTCT CAAAAAGTTT TTAATGGAGG AAACATTATA
AGAAACATGG CATTTACGCT TCAGCCAAAA GAAAATTTTG AGGAAGCGCT AATTGAAAGT
GAGCAATTTT CAGCAGAAAT TCAAGACTAC TTAAAACAAG TACATACCAT TGCTCCAAAT
GATATGAGTG CCATAAATGT GAATAATACA TTAGAGCAAA CAAAACGCTT TTACGATTTA
ATTTGGATGA TACGCACCTT CTTTTGGGGT GTGGGCATAT GTACCATTAT TGCAGGAGTT
GTAGGTGTAA GTAATATCAT GCTCATAATT GTAAAAGAGC GCACTAGAGA GATAGGTGTA
AGAAAAGCAC TTGGCGCACA ACCGTGGTCT ATTATAGGAA TGATTCTTCA TGAATCTATT
TTTGTAACCG CAATTGCCGG TTTTACAGGC TTGGTGTTTA GTATGGCACT TTTAGAAATT
ATAGGGCCAA ACATCGAGAT GGATTATATT TTAAATCCTT CTGTAAATTT TAATGTGGCA
ATTACAACCG TATTTATTTT AATAATTGCA GGCGCAATTG CAGGCTTTTT TCCTGCGTGG
AGAGCAGCTA GTATTAAACC TATTGAAGCC TTAAGAGACG AATAA
 
Protein sequence
MFNIERWQEI FQTIAKNKLR TFLTGVSVAS GIFILVILLG FGQGMENGIS KEFQNDASNR 
ISVWSGVTTV EHKGLNPGRF IQMKNKDFEF ITKKYSDKIE NKSSLYRIWN GLATHGKESG
SYRVEGVHPD YQFLENETLT AGRYLNQNDI DHNEKVVVLG HKVKRDLFKE EDAIGKQLQV
SGVNFKVVGV YTDPGGEREE ARIFLPITTS QKVFNGGNII RNMAFTLQPK ENFEEALIES
EQFSAEIQDY LKQVHTIAPN DMSAINVNNT LEQTKRFYDL IWMIRTFFWG VGICTIIAGV
VGVSNIMLII VKERTREIGV RKALGAQPWS IIGMILHESI FVTAIAGFTG LVFSMALLEI
IGPNIEMDYI LNPSVNFNVA ITTVFILIIA GAIAGFFPAW RAASIKPIEA LRDE