Gene CA2559_01000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_01000 
Symbol 
ID9295682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp235138 
End bp237093 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content33% 
IMG OID 
ProductLysM-repeat domain protein 
Protein accessionYP_003714968 
Protein GI298206789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TCCTAGCCAG TCTAATCTTC TTTTTAGCAT TCAATTTACA AACGAATGCA 
CAAGAATTTT TGACATATAC AGTTAATCAA GACGATACTG CCACTAGTTT GGCTAAGCGT
TTTAATACTA CAATTCAAGA AATATATAGG TTTAATCCAG ATGCTAAAAA TGGATTGAGA
AAAGGTGCTG TTTTAGTGAT CCCTAAAAGC ACTTCTGCTC AAAACAATAC GGCAAACTCG
CAAGACCGCA CGCCAAAAAC CTTTAAAACA CATAAAGTAA AGCGTAAGGA AACCTTATAC
AGTTTATCTA AAGAGTATAA TGTTACTGTA GATGAGATTA AGAGGTACAA TAAATGGTTG
TATGCCGAGC AATTAAAACG AAAGGACAAA ATAAGAATAC CTGTGTATCC AAATGTTGTT
ATTTCAGATA CTCAAACTGT TGATGATCCT AGGTTTATAA TTAAAGAAGA ACCTGTTGTT
AAAATTGTAA GAACACCTTC TGGGAAAACA ACCCACACCG TTCAAGCTAA AGAAGGGAAA
TACGGGATCT CTAGAAAATA TGGGATGACC ATAGCCGAGT TAGAAGCTAT GAATCCTGAT
ATGGAAGAAC CTATACAACC AGGACAAGTA TTAAATGTAA AAGGCGAAGC TTCTACCGAA
AGCACTGTAA TTACAGATGA ACGATTTACA TTTTATGAAG TTAAACCGAA AGAGAACTTC
TTTAGGTTAG AGCAGCGTTT CAATATTTCT GAAGACTCAT TAATTGCACT AAATCCTAAA
TTAGAAGAAG GACTAAAAGT AGGAATGATT ATAAAAATTC CTAAGAAGAA TACTAGTATT
GCATTTGGTA ATGATGAGCT TGTTAACCTA GAAGCGTCTA TTAGAAACTA CGATGCTAAA
ACTGTAGCAT TATTATTACC ATTTAATAGT CATAAGATTA CAAACGATTC GCTTTCAAAT
ACAGAAGAGC GCATTAAGAG AGATCGTGTT ATGCGTATTT CATTAGATTT TTATAGTGGT
GCCTTGGTTG CATTGGAAGA AGGAAAACAA AAAGGGTTGA GTACGACCCT AAGAGTTTTT
GATACAGAAC AAAGCACATC TAAAGTAAGA GCTATTATAA ATGATAATAA CTTTAATGAT
GTAGATGTAG TTGTAGGACC GCTTTTAAAT AGTACGGTTG AGGAAGCTTC TGCATTACTT
AACAGAAAAG ACATTCCGGT AATTTCACCA TTGTCGAGTA GAAAAGCTAA CGGAAGAGAA
AACCTTATAC AGTCTCGCCC TACAGATGAT ATGTTACACG AGGTTATGCT TAGTTATCTT
GAAGCTATGC ATACAGACCA AAACATAGTT ATTTTGGCAG ATGATAATGC ATCATCTATT
AAATCTCTTA TAACATCTAA ATTTCCAACT GCTTCAACTT TAAAAAAGCA AGAAGACAAT
TTTGTGTATC AAAATGATGT AAGCAAGCAA TTGGTAAGTG GAAAAGACAA TTGGTTTATT
GTAGCTACAG AAGATGTAGC ATTATTAAGT AATCTTTTAT CGTATTTAAA CGCTTACCGT
TCTAAACATA ACATACAACT ATTTGCTTTG GAGAAAACAT CTGCGTTTGA TAGTGAAGAT
GTTTCAAACG ATCATTTAAG TAATCTTAAA TTTACTTTTC CTTCAGTAGA TAAAGAATTT
GATTATGAGA ATAAAGCCAA ATTCATAATA GATTATAATG CTAAATACGG TATTGCTCCT
AATAAATATG CAGTGCGTGG TTATGATATT ATGTATGATA CGTTGTTGAG GTTGGCAAAT
TCAGACACTT ACATGGAATC GTTAGAAAAT AATATAGCTA CAGAGTACAT TGAAAACAAA
TTTAGTTATG TTGAAAACGG TATAAGTGGC TATATGAATA ACGGGATCTA TATTATGCAA
TATGGAGAAA ACCTTACCCT AAAACCTGTA GAATAA
 
Protein sequence
MKTILASLIF FLAFNLQTNA QEFLTYTVNQ DDTATSLAKR FNTTIQEIYR FNPDAKNGLR 
KGAVLVIPKS TSAQNNTANS QDRTPKTFKT HKVKRKETLY SLSKEYNVTV DEIKRYNKWL
YAEQLKRKDK IRIPVYPNVV ISDTQTVDDP RFIIKEEPVV KIVRTPSGKT THTVQAKEGK
YGISRKYGMT IAELEAMNPD MEEPIQPGQV LNVKGEASTE STVITDERFT FYEVKPKENF
FRLEQRFNIS EDSLIALNPK LEEGLKVGMI IKIPKKNTSI AFGNDELVNL EASIRNYDAK
TVALLLPFNS HKITNDSLSN TEERIKRDRV MRISLDFYSG ALVALEEGKQ KGLSTTLRVF
DTEQSTSKVR AIINDNNFND VDVVVGPLLN STVEEASALL NRKDIPVISP LSSRKANGRE
NLIQSRPTDD MLHEVMLSYL EAMHTDQNIV ILADDNASSI KSLITSKFPT ASTLKKQEDN
FVYQNDVSKQ LVSGKDNWFI VATEDVALLS NLLSYLNAYR SKHNIQLFAL EKTSAFDSED
VSNDHLSNLK FTFPSVDKEF DYENKAKFII DYNAKYGIAP NKYAVRGYDI MYDTLLRLAN
SDTYMESLEN NIATEYIENK FSYVENGISG YMNNGIYIMQ YGENLTLKPV E