| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1305 |
|---|
| Symbol | |
|---|
| ID | 4010817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1374319 |
|---|
| End bp | 1375512 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637953892 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_556512 |
|---|
| Protein GI | 91781305 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.614657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGAG AAATCAGAAT GGGAGAGAAC TCACGAGAGT CCGCCACGCG GCTACCTGCC
GACGCCGGAT GGCGTATCGG CGTGTTGTAC TCCCGTACCG GAGTGACTGC GGCAACCGAG
TCAGAACACT TTTTCGGCAC CGCGCTCGCG ATCGAGGAAG TCAACGCGGC TGGTGGTGTT
GACGGGCGCC AGCTTGACCC GGTTGTCTAC GACCCAAAGA GCGACCCGGA CGAATATCGC
CGCCTCGCCT CGCGGATGCT GCAGGAAGAC GACGTGACGG TGATTTTCGG CTGTTCGACG
TCGTCGAGCC GAAAAGCAGT GTTACCGGTG ATCGAGCGCA ACAACGCGCT GCTCTGGTAT
TGCTCGATCT ATGAAGGATT CGAATATTCG CCCAACGTGA TCTACACCGG GGCGGTGCCG
AACCAGAACA GCATGCAGCT GGCCGCATAT CTGCTCCGTA ATCACGGCCG CCGCTTCTTT
CTGGTGGGGG CAGACTATAT CTATCCACGA GAGTCGAACC GCATCATGCG GGACATGGTC
GAGCAACATG GCGGCGAAAT CGTGGAAGAA CTCTATTTAC CTAGCGATGC CGATCCCTCC
GCATTGGACC AGGTGGTCCG GCAGATAAAG GCTGTTAAGC CCGACGTAGT TTTCTCCACG
CTAATCGGCC GTGGCGCGCG TGCCTTTTAT CAGTTGTACC GCGAGCACGG TATCGACCCT
TCGCGCATCC CGATCGCAAG CCTGACGATG ACCGAAGGCG AAACGCGGAT GATTGGTCCT
GAATTGTGCG GCGGTCACAT CATTTCAGCC AGCTATGTCA ACACGCTGAA CCATGCGAGC
AACAAGCGCT TCCTCGAATC ATGGCGGATG CGATTCGGAG ATCAGCCGGC CAGCATGTGG
TCCGAGATGG CGTACAACCA GGTCCATCTT TTTGCGCTAG CGCTGGCTCG TACGCGAAGT
CTTGACACGG CAAAGCTGGT GGAAGCGGTT CACGAGGTTG AATTCGATTC GCCAGAAGGT
ATGCTGAAAA TCGATCGGGA GAACAACCAC GCGGTCTTGA CCCCTCGCAT TGCCATTTGT
AGACCAGACG GCTTGTTCGA TATAGTTTGG GAGGGCCGCA TCCCGATCAA ACCAGATCCC
TATCTGACGT CGTATGGATT CGCGGAGTTC TGGCTTGACG GAGATGCGGC ATGA
|
|---|
| Protein sequence | MQGEIRMGEN SRESATRLPA DAGWRIGVLY SRTGVTAATE SEHFFGTALA IEEVNAAGGV
DGRQLDPVVY DPKSDPDEYR RLASRMLQED DVTVIFGCST SSSRKAVLPV IERNNALLWY
CSIYEGFEYS PNVIYTGAVP NQNSMQLAAY LLRNHGRRFF LVGADYIYPR ESNRIMRDMV
EQHGGEIVEE LYLPSDADPS ALDQVVRQIK AVKPDVVFST LIGRGARAFY QLYREHGIDP
SRIPIASLTM TEGETRMIGP ELCGGHIISA SYVNTLNHAS NKRFLESWRM RFGDQPASMW
SEMAYNQVHL FALALARTRS LDTAKLVEAV HEVEFDSPEG MLKIDRENNH AVLTPRIAIC
RPDGLFDIVW EGRIPIKPDP YLTSYGFAEF WLDGDAA
|
|---|
| |