| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0605 |
|---|
| Symbol | |
|---|
| ID | 4010119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 623662 |
|---|
| End bp | 624810 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637953233 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_555853 |
|---|
| Protein GI | 91780646 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00592793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0752366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTA CTGAATTTCG CTATCACCCC ATTCCTCTGG ATGACGAACC ATTACGCAAG
GAGGTACGTG AGTTCCTTGC CGATGCGCTG TGCGACCGGG CGCCCTTGCA GCGCGCCGAA
TCGTGGATGG GCGCCGACCC GGCGTTCAGC CGCAAGCTCG GCGAGCGCGG CTGGATCGGC
ATGGCGCTGC CGAAGCGCTA TGGCGGCAGA GAAGCCGGAC CGTTTGCGCG CTACGTCGTC
ATCGAGGAAC TGCTCGCCGC CGGCGCACCG GTATCGGCGC ACTGGATCGC CGATCGCCAG
AGCGGTCCGC TGATCCTGCG CTACGGCACC GACGCGCAAC GCGAACGGTA TCTGCCGGCC
ATCTGCCGCG GCGAAAGTTA TTTCTGCATT GGCATGAGCG AGCCGAACTC GGGTTCCGAC
CTGGCCTCGA TCCGTACCCA TGCGCAGCAC GCCGGCGACG GTTGGGTGCT CAACGGGCAC
AAGCTCTGGA CAACCAACGC GCACTATTCC CACTACATGA TCGCGCTGGT GCGAACCGCC
GCGAAGACGG CGTCGCGTCA CGAAGGCATG TCGCAGTTCG TCATCGACCT GAAGGCGCCG
GGCGTGACAA TCCGTCCGAT TCGCGACCTG GCCGGCGGCG AGCACTTCAA CGAAGTCTTT
TTCGACGATG TCGAGCTCGG TCCCGACGCG CTGATCGGCA CCGAGGGCCA GGGCTGGGAA
CAGGTCACGG CAGAACTGGC ATTCGAACGC AGCGGTCCCG AACGTTTCCT GAGCAGCATC
GCCCTGCTGC ACACGATGAT CGACGCCATC GGCAAGCGGC CCGACGCGCT GCAGGCTCGC
GAGATCGGCC GCCTTGCTGC GCGCCTGTTC ACCTTGCGGC AGATGTCGCT GTCGGTCACG
GCGGAGCTCG CGGCGGGCCG CAATCCCGCG TGGGCCGCTT CCTGCGTGAA GGATCTCGGC
ACTGCATTCG AGCAGGAGAT TCCCGAAGTG GCGCAGTTGC TGCTCGATGT CCCGCCCAGC
ACCGCGGGCG GCTCCGATCA CGCGCGCGTG CTCGCCTACC TCATGCAGAT GGCACCTTCG
TTCTCGCTGC GAGGCGGCAC ACGCGAAATC CTGCGGGGCA TCATCGCCCG CGGACTTGGA
CTTCGGTAA
|
|---|
| Protein sequence | MSVTEFRYHP IPLDDEPLRK EVREFLADAL CDRAPLQRAE SWMGADPAFS RKLGERGWIG
MALPKRYGGR EAGPFARYVV IEELLAAGAP VSAHWIADRQ SGPLILRYGT DAQRERYLPA
ICRGESYFCI GMSEPNSGSD LASIRTHAQH AGDGWVLNGH KLWTTNAHYS HYMIALVRTA
AKTASRHEGM SQFVIDLKAP GVTIRPIRDL AGGEHFNEVF FDDVELGPDA LIGTEGQGWE
QVTAELAFER SGPERFLSSI ALLHTMIDAI GKRPDALQAR EIGRLAARLF TLRQMSLSVT
AELAAGRNPA WAASCVKDLG TAFEQEIPEV AQLLLDVPPS TAGGSDHARV LAYLMQMAPS
FSLRGGTREI LRGIIARGLG LR
|
|---|
| |