Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2524 |
Symbol | |
ID | 4006980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 595446 |
End bp | 596534 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637950187 |
Product | OmpC family outer membrane porin |
Protein accession | YP_552817 |
Protein GI | 91777609 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.510501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.104939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAACTG GTCTGCTGGT CGGCGGTTGC GCCGCGATTC TTGCCGCCCC GGTGTGGGCG CAGTCGTCTG TTACGCTTTA CGGCAGCATC GACGTCGGCC TCGACTTCGT GTCGAATACA CAGGGCAAGC ATCTGTATCA GGAATCTTCC GGCAAGCGTC AGCCGGATCG CTGGGGGTTG TTGATCAAGG AGAATCTCGG CGGTGGCAAC ACCGCGTTCG CGCGGCTCGA ATCGGGTTTC GTGACCAACA CGGGTGCGCA GATCAATCCG ACCAGTTTCT TCAATCGCGA AGCGTTTGTG GGCTTGTCCA ACGACCGCCT GGGGGCGCTC AGCTTCGGCA ATATCAACGA CTACATCTAT CAGTACGTGG GCCGTCTGAA CAACTCGATA CCGGGCATCT CGTCGTTCTA TACGCCCGGC AATCTGGATG GTCTGGCGAA CAACCACGCG CTGAACAACG CCGTGAAGTA CGAGACGATC AATTTTCACG GCTTTCAGGC GGGCGCGATG AATGCCTTCG GCAACCAGGC CGGCAATTTC AGCGAGGGCC GTCAATATAG CCTCGGCGCG CAGTACGCGA ACGACATGGT GCGGTTCGGC ATTGCGTACA CGATGTCCCA TAACCGGACG GCAGACGTTT TCGGCACGTT CAGTCTGTCT TCGCTTCTTG GCCAGCCGTT GAAGCAGGGC ACCATGTTCA ACGCAAGCCG CTACAGCACG CTCGCCGTCG GCGGCTCGGT GAAGATCGGC TATTTCACGC CGCATCTGAC CTACTCGGGT GTGAAGCTGG AAAACGGCCA GGGCTCCGCG ACGCTGAACA ACTATCAGAC CGGCGTCAAC ATCGACCTGA GCGGCAAGGG TTTTTACATT CTGGGTCTTT CGTGGGATCA CTCGACGTTC CAGAGCCTCG CGATCAACCA GTACAACCTG TTCCTGACCG ATTATCTTTC GAAGAGCACG CAGATCTACG CGGGTGTCGG CCTGCAGCGC GCGGCGGGGC CGGGTGCGCG CGCTGCGCAG TTCGGCTATC AGCCGTCGTC GAGCGGCAGC CAGACGATTG CGCGCATAGG CGTCAATCAC ATGTTTTGA
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Protein sequence | MRTGLLVGGC AAILAAPVWA QSSVTLYGSI DVGLDFVSNT QGKHLYQESS GKRQPDRWGL LIKENLGGGN TAFARLESGF VTNTGAQINP TSFFNREAFV GLSNDRLGAL SFGNINDYIY QYVGRLNNSI PGISSFYTPG NLDGLANNHA LNNAVKYETI NFHGFQAGAM NAFGNQAGNF SEGRQYSLGA QYANDMVRFG IAYTMSHNRT ADVFGTFSLS SLLGQPLKQG TMFNASRYST LAVGGSVKIG YFTPHLTYSG VKLENGQGSA TLNNYQTGVN IDLSGKGFYI LGLSWDHSTF QSLAINQYNL FLTDYLSKST QIYAGVGLQR AAGPGARAAQ FGYQPSSSGS QTIARIGVNH MF
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