| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2938 |
|---|
| Symbol | |
|---|
| ID | 4003968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1676881 |
|---|
| End bp | 1678032 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637946701 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_558091 |
|---|
| Protein GI | 91782885 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.679208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTC GCAATACGCT GAAACCGCTT GCCCTGTTCG TTGGCGCTAT TTTCGCCGTC
GCGCCGCCGG CCACGTTCGC CGACGACCTG CCGGTGAAGA TCGGTTTTGC CGCGCCGCTG
ACGGGCGCCA ACGCCGGCTA TGGCAAGGAT CTGGAGAACG GTGTCCGGCT CGCGATCGAG
GAAGCCAACG CGCAGAAGAT CAAGATCGGC GACAAGGTCG CGCAATTCCA GATCGTTTCC
GAAGACGACC AGGCCGACCC GCGCATCGGC GTGCAGGCCG CGCAGAAGCT GGTCGACTCG
GGCGTGTCGG CCGTGGTGGG TCACTTCAAC TCGGGCACGA CGATTCCCGC CTCGCAGATC
TACGAGCAGG CCGGCATTCC GGTGATCGAC CCGGCGGCCA CGAACCCGGT CATCACGGGA
CGCGGCTTCG CGAACACCTT CATGGTGATT TCCACCGACG GGCAAAACGC CGGCAATGCG
GGCGTGTATG CCGTGCAGGT GACCAAGGCC AAACGCATCG CGATCATCGA CGACCGCACC
GCGTTCGGCC AGGGCGAGGC CGACGAATTC GAGAAGGCGG TGAAAGCACA CGGCGGCAGC
ATCATCGCGC GTGAGTACAC CGACAATAAA GCGGTCGATT TCAGCACGCA GATCACCAAG
CTCAAATCGG CCAATGCCGA TCTGATTTTC TTCGGCGGGC TGGACACGCA GGCCGCCGGC
TTTGCGAAGC GCATGAAGCA ACTCGGCATG AACGCGCAAC TGGTGGGCGG CGGCGGCGTG
ATGGATCAGG ATTTCATCAA GCTCGCCGGC GATTCGTCCG AAGGCGTGAT GGCCTGGGAA
TATGGACGGC CGCTCGCCCA GCTGCCCGGC GGCAAGGATT TCTCCGCGAA GTTCAAGAAG
CGTTTCGGCG TGGATATCCT GTCGTATGCG CCGTTCGGCT ACGACGGCGC GTGGGCCGCG
ATCAAGGCCA TGCAGCAGGC CAAATCCGCC TCGCCGAACG TCTACCGGCC CGTGCTCAAG
GCCATCGATT TCGACGGCGT GACCGGCAAG ATTTCGTTCG ACAGCACCGG CGCGCTGAAG
AGCGGCGCAT CGACGCTTTA TCAGGTCAAG AGCGGCGCGT GGGTGCCCAT CGTGACGAAG
ACCGGCGGCT AG
|
|---|
| Protein sequence | MSLRNTLKPL ALFVGAIFAV APPATFADDL PVKIGFAAPL TGANAGYGKD LENGVRLAIE
EANAQKIKIG DKVAQFQIVS EDDQADPRIG VQAAQKLVDS GVSAVVGHFN SGTTIPASQI
YEQAGIPVID PAATNPVITG RGFANTFMVI STDGQNAGNA GVYAVQVTKA KRIAIIDDRT
AFGQGEADEF EKAVKAHGGS IIAREYTDNK AVDFSTQITK LKSANADLIF FGGLDTQAAG
FAKRMKQLGM NAQLVGGGGV MDQDFIKLAG DSSEGVMAWE YGRPLAQLPG GKDFSAKFKK
RFGVDILSYA PFGYDGAWAA IKAMQQAKSA SPNVYRPVLK AIDFDGVTGK ISFDSTGALK
SGASTLYQVK SGAWVPIVTK TGG
|
|---|
| |