| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5419 |
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| Symbol | |
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| ID | 4016378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 170837 |
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| End bp | 172183 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637945039 |
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| Product | HipA-like |
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| Protein accession | YP_552171 |
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| Protein GI | 91791221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACG TCGAAGTCCT CAACATATTC CTGAACGACC GGCCTGCCGG CAAACTTTTC
CGCTTTGCCA ACGGAACCAC CAGTCCCATT GTCCGGTTCG TGGCAGACGA TGCCTTTGCC
GACGATCCCA AACAGGACAC CCTGTCGGTC AGCATGCGCG CCCGCGATCC GGCGCAACAA
GCGTCCTTGT GGAAAGACAT CAGCGCCCCG ATCTTCAATG GCGCCGATGG TCGCCTGCCC
GTATTTTGCC AAAACATGCT GCCAGAGGGG CTGTTCCGCG CCCACCTGGC ACAGGAGCGC
GGTTGCAGGG AAGACGATCA CTTCGCCCTG TTTGCGGCCA GCGGACTGGA TCTGCCAGGC
GCGGTGAAGG CGATGCCGGC AGTGCTGTCC CGCGAAGAAC TGGCTCGCCT CGTCACGCAG
GAGAACGACG CGCTGGAAAT GTCAGTCACT GCGGATCCAT TGCCGCTTGG CGTGTCGATT
TCTGGCATGC AGCCCAAGGT GGGCCTGATC GAGCAGGGTG GGCGCTACGT GGCGCGCAAG
CGCCATGGCG TGACCCGCAT CATTGGCAAG CTGCCCCAGG TGGACCGGCC CATGCTGCCC
GAAGTCGAGG ATTTGAGCCT GTCACTGGCC CAGGCCGCGG GCGCCAATGT GTGCGAACAC
AAATTGGTGT CGCTGGAAAT GCTGAAATTT GAGCATGGCT ACACACTGGG CGGCAGCGGC
AATTTCCTGG CCGTCACCCG ATTTGACCGG GACGGCGGCA AGCGCATTCA CTGCGAGGAT
TTCGCGCAGG CACTGGGCGT TGATCCAGGC AACAAGTACA CCGGCGCCAC CTACGCCGCC
ATGGCCGGTT TGATGCTTCG ATATCCAGAC ACCCTGGGGC TGACCGCAGT GCACGAGATG
CTGCGCCTGA TTGCCATCAA TGAGCTGATG GGCAATCTGG ATGCCCATTT GAAGAATTTC
TGCCTGCTGT ACCCGGACGG GCGCAACCCG GTACTTTCCA AGGCCTTTGA CATCGTGGCC
TGGTCGGTCT ACATCACCGG CCAGGGCAAC GCGCTCGCGC TTTACCGTAC CGAGGATCCA
GCAAAGCACA AGGTATCCAG GACTCTGGGC CCAGCGGCGC TTCGCGATTT CTGCAACCTG
CTGGGCATTG CTGAACAACC TTGCTCCAAA GTCATACGTG AAACCGTGGC CCGGGCGCAG
GATCTGTGGC CCGACATGAT CCGCGACAGT CAGATGCTGG ACGCGCAGAA GGAACGGCTG
CTGAACCACC TGGAGACGCA CCCGTTTGCA CGGCGCAAGG AAGGGGCGGC CGCCAAGCTG
CAAGCGAAAC AAGCGAGCGA CCAATAA
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| Protein sequence | MLNVEVLNIF LNDRPAGKLF RFANGTTSPI VRFVADDAFA DDPKQDTLSV SMRARDPAQQ
ASLWKDISAP IFNGADGRLP VFCQNMLPEG LFRAHLAQER GCREDDHFAL FAASGLDLPG
AVKAMPAVLS REELARLVTQ ENDALEMSVT ADPLPLGVSI SGMQPKVGLI EQGGRYVARK
RHGVTRIIGK LPQVDRPMLP EVEDLSLSLA QAAGANVCEH KLVSLEMLKF EHGYTLGGSG
NFLAVTRFDR DGGKRIHCED FAQALGVDPG NKYTGATYAA MAGLMLRYPD TLGLTAVHEM
LRLIAINELM GNLDAHLKNF CLLYPDGRNP VLSKAFDIVA WSVYITGQGN ALALYRTEDP
AKHKVSRTLG PAALRDFCNL LGIAEQPCSK VIRETVARAQ DLWPDMIRDS QMLDAQKERL
LNHLETHPFA RRKEGAAAKL QAKQASDQ
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