| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4903 |
|---|
| Symbol | |
|---|
| ID | 4012413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 5194965 |
|---|
| End bp | 5195456 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637944545 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_551677 |
|---|
| Protein GI | 91790725 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.533642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCCTAGCCGC CCCCATCAGT TTTGACATTC AGGGTCTGGC CCAGGCCATC
ACGAATTGCC ACAGTGGCGA CGCCTTGCGC TGCCAATTCA ACCAGCCACA TTGGGACATT
CTTGCCAGCT ATCTACAGCC CTTTGCCGTC AACAGCGGCC AGGTGCTGAT TGAGCAGGGA
GCGCTGGACC GCACGCTGTA TTTTGTTGAA AGCGGTACCT TGAGCGTGCA CTATGAAGAT
GAGAAAGCGC GCGTTCGGAT GGCACTGGTC GGTGCCGGCA CGGTCGTGGG TGAAGGCGCA
TTTTTCTCGC ACCAGCCACG CAGTGCCACG GTGAATGCCT CCACACCCTG CAAACTCTGG
TGCCTGACGC CCATGCGCTT TCTGGAAATG GCCAACCGCC ACAGCCCGAT TGCGCTGGAA
CTGACCGTGG CGATGGGCGC CGTGATGGCC AAGCGCCTGT ACAACCGTCC CCGTCGTGTG
GCGGTGACCT GA
|
|---|
| Protein sequence | MNAPLAAPIS FDIQGLAQAI TNCHSGDALR CQFNQPHWDI LASYLQPFAV NSGQVLIEQG
ALDRTLYFVE SGTLSVHYED EKARVRMALV GAGTVVGEGA FFSHQPRSAT VNASTPCKLW
CLTPMRFLEM ANRHSPIALE LTVAMGAVMA KRLYNRPRRV AVT
|
|---|
| |