Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4822 |
Symbol | |
ID | 4012512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 5104130 |
End bp | 5105896 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637944465 |
Product | histidine kinase |
Protein accession | YP_551597 |
Protein GI | 91790645 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCTG CAACCGCCAT CCTGATGTCT GTTCTGGTTT TCCTCTATGA CAAAACGCAA AGCTTTGGTG GACCCGATTA CTTTGAGAAT GTCGTCCTGC TAAGGCATCT CAAGCAACTG GATGCCGAAT GGGAACTGGA CGTTATGAAG TCCAAGGTCG GCATCAACAC GCACTACGAT CCCCTGGCCG ACTCCCTGAT CGAATTGAAC CGGCTGCTGG AGAAACTCAA GGCGGACATG GGGACCCAAA AACACGCCGA CGCCGCTGCG TTGGCAGAGG GCCATGCGGC GCTGTTCCGC GCCATCCAGG AAAAATCCGT CCTGATCGAA CAGTTCAAAT CGAACAACGC GGTTCTGCGT AACTCGCTGG CCTTCTTGCC GACTGCGGCA ACGGACGTCG AACAGTCGGT CGGGCAAACC AGTGAAAGCG CGCAGTCGGC AGCCAGACGC GCCTTGATCA GCGTGAACAA GCTGCTGCTC GCCAGCCTGC TGTATAGCCA GAGCGCATCG GATGACAAGG GTTCTGAAAT CCAGGCTGAG TTGAGCCAGC TTGAAGCCGG TTTGCATGTT CTTCCATCGG ATGTCAGGGA GAGGCTGGAA ATTTTCGGCG CGCATGTCCG CACCATCCTG CGCGAGCAAA AGGTCGTCAA TCAACTTCTC GGCAGTATTA CTGTCGTGCC GACGGCAACC CGTATCGATG AGCTCAACAA CACGTTGAGC GCTGAACAGC AACGCGCCAC GATACAGAGC GGGCAGTATC GTGGGTACCT GCTGATTTTC TCGGCGGTGA TGGTGGCGCT GCTGCTGTAT GCGGCGATCC GCCTGGTGCG CAGTCACGCC GTGATCAACC GCGTCAACGA GGAACTCCAG GACGCCAATG AAAATCTGGA GCAACGGGTT CAGGAACTGC ACCAGACGCA AAGTGAACTG GTCGCCACGG CGCGCCAGGC CGGCATGGCG GAGATGGCCA CCAACGTGCT GCACAACGTG GGCAACATCC TCAACAGCGT CAACGTCTCC GCCGACCTGG TCGGCAGCAC GCTGCGCACC TCCAGGACCC ATGGTTTGAC GCGGGCCGTG CAATTAATGA ACGAGCACGC GGCGGACCTG GGCGATTTTC TGACCCGTGA CGACAAGGGC AAGATGCTGC CCGACTACCT GAGCGGGATT GCGCGAGCCC TGACGCAGGA GCAGCAAGAC ATGCTTAAGG AACTGGGGCA CCTCACCCGA AGCATCGATC ACATCAAGGA CGTGGTGGCC ACCCAGCAAT CCTACGCAGG GGTGTCCAGC ATCATCGTGC CGGTCCAGAT ATGCGATCTG GTGGAGGATG CCCTGCGCAT GAATGGCGGA GCACTCGCGC GCCATCAGGT GACCGTGGTC AAGGAGTTTG CGCAGGTACC GGTGGTACGG CTCGACCGGG CGCGCGTGCT GCAGATCCTG GTGAACCTGA TCAGCAACGC CAAGAATGCC ATGGCGGGCA TGACGGGTGG ATCGCACCGG ATCACACTGC GTGTGGACGT CGCCGCCGGC TCCAGTTTGC GGGTATCCGT CAGGGATGAG GGCGAGGGCA TCATGGAGGA GAACCTGACG CGGATCTTCG CGCACGGATT CACCACCCGC AAGGCAGGCC ACGGCTTCGG GCTGCACAGC TGCGCGCTGG CGGCCAGGCA GATGGGCGGC GCCCTCACGG CCCTCAGCGA CGGCCCCGGC AAGGGCGCGA CCTTCACGCT GGTACTGCCG ATCGACGCAG TGCAGGCCGA GTCATGA
|
Protein sequence | MAAATAILMS VLVFLYDKTQ SFGGPDYFEN VVLLRHLKQL DAEWELDVMK SKVGINTHYD PLADSLIELN RLLEKLKADM GTQKHADAAA LAEGHAALFR AIQEKSVLIE QFKSNNAVLR NSLAFLPTAA TDVEQSVGQT SESAQSAARR ALISVNKLLL ASLLYSQSAS DDKGSEIQAE LSQLEAGLHV LPSDVRERLE IFGAHVRTIL REQKVVNQLL GSITVVPTAT RIDELNNTLS AEQQRATIQS GQYRGYLLIF SAVMVALLLY AAIRLVRSHA VINRVNEELQ DANENLEQRV QELHQTQSEL VATARQAGMA EMATNVLHNV GNILNSVNVS ADLVGSTLRT SRTHGLTRAV QLMNEHAADL GDFLTRDDKG KMLPDYLSGI ARALTQEQQD MLKELGHLTR SIDHIKDVVA TQQSYAGVSS IIVPVQICDL VEDALRMNGG ALARHQVTVV KEFAQVPVVR LDRARVLQIL VNLISNAKNA MAGMTGGSHR ITLRVDVAAG SSLRVSVRDE GEGIMEENLT RIFAHGFTTR KAGHGFGLHS CALAARQMGG ALTALSDGPG KGATFTLVLP IDAVQAES
|
| |