| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3683 |
|---|
| Symbol | |
|---|
| ID | 4013633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3894695 |
|---|
| End bp | 3895675 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637943338 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_550482 |
|---|
| Protein GI | 91789530 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0852906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CACGACGTCA AGCACTCGCC CTGGCTGCCT GCATGGGTGC CGCATTGTCC
ACGGGCAGCG CCATGGCCCA GGCCTATCCG AGCAAACCCA TCACGCTGGT CGTGGCCTAC
CCGGCCGGTG GAGACACCGA TGCCATGGCA CGCCTGTATG CCGAAAAACT GACGGCCCGC
CTGGGCCAGC CGGTGATCGT GGACAACCGC CCCGGCGCCA GTGGCACCAT CGGCAGCGCC
TACGTGGCCA AGGCGCCGGC CGATGGCTAT ACCCTGCTGC TCGCGCCCAG CACCTTCTCC
ATCGCGCCGC TGGTGCTCAA GACCGGTTCC GGAACGAGCT ACGACGTGCT GAATGGCTTC
ACCCCCATCG TCCAGACCAG TCTCCAGCCG CTGTTCATCG CGGCCAGCGC TTCCGCCGGC
GCCAAGGATG TCAAGGAGCT GGTCGCCCTG TCCAGGGTCA AGATGCTGTC TTATGCCAGC
CCCGGCAGCG GCTCACCGAT GCACATTCTG GGCGAGATGT TCAACAAGTC CGCCGGCGTG
AAGATTTCGC ACGTGCCTTA CCGCGGTGTG GCGCCGGCAG TCAACGACTT GCTGGGTGGC
CACGTGCCGG TGACCTTCAT GACCTACGGC CCGGTCGCGC CGCACATTGC CACCGGCAAG
GTGGTGGCGC TGGCCGTGGC GCAACCCCAG CGCTCCTCCC TGGCGCCCAA TGTGCCGACG
CTGGCCGAGC TGGGCTACAA GGACGTGGAG GTGGGCGCCT GGCAGGGGCT GTTCGGGCCC
AAGGGCCTGC CTGCCGACAT CACCAAAACG CTCAACAGCC ATCTCAACGA GATTCTCAGG
ATGCCCGATG TGACCGCCAA GATGGTCACG TTCGGTGCGC TCCCGGCCGG TGGTGACCCG
TCGCGGCTGG CCAAGGCCAA TGCTGGCGAC TACGAGCACT TCGGCAAGAT CGTCAAGGAA
TTCGGCATCC AGGCCGACTG A
|
|---|
| Protein sequence | MKFTRRQALA LAACMGAALS TGSAMAQAYP SKPITLVVAY PAGGDTDAMA RLYAEKLTAR
LGQPVIVDNR PGASGTIGSA YVAKAPADGY TLLLAPSTFS IAPLVLKTGS GTSYDVLNGF
TPIVQTSLQP LFIAASASAG AKDVKELVAL SRVKMLSYAS PGSGSPMHIL GEMFNKSAGV
KISHVPYRGV APAVNDLLGG HVPVTFMTYG PVAPHIATGK VVALAVAQPQ RSSLAPNVPT
LAELGYKDVE VGAWQGLFGP KGLPADITKT LNSHLNEILR MPDVTAKMVT FGALPAGGDP
SRLAKANAGD YEHFGKIVKE FGIQAD
|
|---|
| |