Gene Bpro_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3438 
Symbol 
ID4013896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3638858 
End bp3639598 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID637943101 
Productalpha/beta hydrolase fold 
Protein accessionYP_550245 
Protein GI91789293 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.410588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTGGG TGCTGTTGAG GGGCCTGACA CGCGAGGCGC GGCACTGGGG CGGCTTTGCC 
GAGCAGCTGG CGCAGCAGAC CTGCGAAGAG GTCATCGCCA TCGACCTGCT GGGCAACGGC
GAATTTGCAT CGCTGCCCTC GCCTACTTCA GTCAGTGGCA TGGTGGATTT TTTGCGTTCG
CAACTGCAGG TTCGCCAACA AGCGCAGCCT TTCAAGCTGC TGGCCATGTC GCTGGGCGGC
ATGGTGGCGA CGGACTGGGC GCAGCGCTAT CCGCATGAAG TCGCGCGGCT AGTGCTCATC
AACACCAGCC TGCGGCCCTT CAGCAGCGCT ACGCAGCGCC TGCGGCCCCA CAACTGGCCA
GCGCTTGCTC TGCTGGCCGC ACGCTGGCGC GATGCAGCGC AAGTGGAGCA AGCAGTTCAC
AGGCTGACCT GCAACAACAC CGGCACACGC GATGCCGACA TCGCCGCGTG GTTGCGCATT
CGCCAGAGCG CGCCCGTCAC GGCAACGAAC GTTGCGCGGC AACTCTGGGC GGCAGCAAGC
TACGCATGCG CTGCGAAAGC ACCAGCGTGC CCGACACTGG TGATGTCTTC AGCCTGCGAT
CATTTGGTCG ACCCGGCATG TTCGGCGCGG CTGGCCGACG CATGGAAGGC CGGCCATGTG
CAGCACCCAT GGGCCGGGCA TGACCTGCCG CATGACGACA GCGCATGGCT TTTCGGGCAG
TTGAAAGACT GGCTGGCTTA G
 
Protein sequence
MTWVLLRGLT REARHWGGFA EQLAQQTCEE VIAIDLLGNG EFASLPSPTS VSGMVDFLRS 
QLQVRQQAQP FKLLAMSLGG MVATDWAQRY PHEVARLVLI NTSLRPFSSA TQRLRPHNWP
ALALLAARWR DAAQVEQAVH RLTCNNTGTR DADIAAWLRI RQSAPVTATN VARQLWAAAS
YACAAKAPAC PTLVMSSACD HLVDPACSAR LADAWKAGHV QHPWAGHDLP HDDSAWLFGQ
LKDWLA