Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3438 |
Symbol | |
ID | 4013896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3638858 |
End bp | 3639598 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943101 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_550245 |
Protein GI | 91789293 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.410588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCTGGG TGCTGTTGAG GGGCCTGACA CGCGAGGCGC GGCACTGGGG CGGCTTTGCC GAGCAGCTGG CGCAGCAGAC CTGCGAAGAG GTCATCGCCA TCGACCTGCT GGGCAACGGC GAATTTGCAT CGCTGCCCTC GCCTACTTCA GTCAGTGGCA TGGTGGATTT TTTGCGTTCG CAACTGCAGG TTCGCCAACA AGCGCAGCCT TTCAAGCTGC TGGCCATGTC GCTGGGCGGC ATGGTGGCGA CGGACTGGGC GCAGCGCTAT CCGCATGAAG TCGCGCGGCT AGTGCTCATC AACACCAGCC TGCGGCCCTT CAGCAGCGCT ACGCAGCGCC TGCGGCCCCA CAACTGGCCA GCGCTTGCTC TGCTGGCCGC ACGCTGGCGC GATGCAGCGC AAGTGGAGCA AGCAGTTCAC AGGCTGACCT GCAACAACAC CGGCACACGC GATGCCGACA TCGCCGCGTG GTTGCGCATT CGCCAGAGCG CGCCCGTCAC GGCAACGAAC GTTGCGCGGC AACTCTGGGC GGCAGCAAGC TACGCATGCG CTGCGAAAGC ACCAGCGTGC CCGACACTGG TGATGTCTTC AGCCTGCGAT CATTTGGTCG ACCCGGCATG TTCGGCGCGG CTGGCCGACG CATGGAAGGC CGGCCATGTG CAGCACCCAT GGGCCGGGCA TGACCTGCCG CATGACGACA GCGCATGGCT TTTCGGGCAG TTGAAAGACT GGCTGGCTTA G
|
Protein sequence | MTWVLLRGLT REARHWGGFA EQLAQQTCEE VIAIDLLGNG EFASLPSPTS VSGMVDFLRS QLQVRQQAQP FKLLAMSLGG MVATDWAQRY PHEVARLVLI NTSLRPFSSA TQRLRPHNWP ALALLAARWR DAAQVEQAVH RLTCNNTGTR DADIAAWLRI RQSAPVTATN VARQLWAAAS YACAAKAPAC PTLVMSSACD HLVDPACSAR LADAWKAGHV QHPWAGHDLP HDDSAWLFGQ LKDWLA
|
| |