Gene Bpro_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2523 
Symbol 
ID4014828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2637412 
End bp2639628 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content61% 
IMG OID637942186 
ProductO-antigen polymerase 
Protein accessionYP_549338 
Protein GI91788386 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0830151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00448531 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAGA AAAAAAGAAA GATAGCCGGC ACATCGACTG CCGGCGAGGC CACGCCCTTG 
GCAAGGCCAG CCGGGGTACC CGCCGCCGCC GCGCGGAATG ACTGGACCGT CATCATTTTT
GCCTGCATGC TGTTTCTCGT GGCCGCCATC GGGGCGCCCT ACGAGGAAAT GCTGCAGGAC
ACCCTGAAGT CGATCGTCGT TTCATTTGCG GCGCTCGGCG CAGGCCTGCT GTTTTTCTGG
CGCCAGCGCC AGCGCCACGA ATACTTCCAC TGGCATGCCC TGATGGGCTT CCCGCTGGCG
CTCATGGCCT ACGCGCTGGG CAGCATGGTG TGGTCTCACA CCTACCTGGC AGGCGTAGAG
GCGATTCGCT GGTTTATTTT CAGCCTGCTG CTGTGGCTGG GCCTGAACAC CTTCACCCGG
GAAAAGTCAC CATCCCTCTT TTGGGGAATC CATGCGGGCG CCGTGGTGGC ATCTCTCTGG
ACGGCCTTGC AATTCTGGAT CGACTTCAGA TTTTTTTCTC AGGGGCCCAA CCCGGCTTCC
ACTTTTGTCA ACCGCAATTT CTTTGCGGAA TATGTCGTCT GCACCCTTCC ATTCTCGGCA
CTGCTGATCG CGCGGGCGGG CAAGCCCCAA GAAATCGCAT GGCTGACCTT CACGACCGCT
TTCAACATCG TGGCCTTGCT GATGACGGGA ACCCGCTCGG CGCTGGCAAC CCTGTGGGTG
CTGCTGTTCC TTGTTCTTCC GCTCGCCGGG TTTTTCTATC GCAGGCAACT GGCGTGTTTT
GCGTGGAACC TCACCCAGCG CCTGGCCGTG ATTGCCCTGC TGCTGGTCAC CATCGTTGGA
TTGGGTTTGA TCCATACCGG TAACCCGAAG ATTGCTGGAG AACTCAACGG ACGGAATGCG
CTTGAGCGCG GCATCTTTCG CACCGTCTCT GTCGTTACCG ACAGCGATGA ATTCAGGACG
GGCTCCTTGT CCGTTCGGTT GACCATGTGG AAGGCCACTG GCAGGATGAT CCAGGACCGG
CCATTGAGCG GTGTAGGCGC CGGAGCCTGG GAGGTCAATG GGCCGCTTTA CCAGACTGCC
GGCTCGCAGC TTGAGACCGA TTACTACGCC CACAACGAAC CTTTGCAGTT GCTGGCGGAG
TATGGCCTGG TGGGTTGGCT CGCCCTGGCA GGCTTGTTGG GCTACCTTGG CCTCGCCGCC
TGGCGCACCC TTGGCGACCG CCGGCCCGAG GCCATGGATG AGGGGCCTGT GCGTGCCGCG
GCGCTCGCCT GTCTGCTGGC ATTGCTGATG GTCAGCAATG CGGGGTTCGC CTGGCGGCTG
GCCTCCACTG GCGCGCTTTT TGCCGTATTG CTGGGCCTGC TTGCGGCATC CGATGCGCGG
CTGGGCTACC GGGGGTTCAG CGGTGGTTCG CGTTTGCCGT GGCATCCAGT TCTTTCCCGC
ACGGCCATGT GGGCCCTGGC GGCGAGCCTG GCACTGGCGA CGTACATCAG CCAGCAGGCG
GCGGAAAGTG AGCGGAAAAT TATCGGCGCC GTCAAATTGG CACTCATGAT TTCAGGCTCG
GGCAACCCCG GCCATCCGCA ATGGAATCAA ACCAAAAAAC ACATGCTGCG CCTGATCGGG
GAGGGCATCG CCATCAACCC CCATTACCGC AAGATCACGC CCATCGTGGC AGACGAACTG
GCGCGCTGGG GGGACTGGAA AAACGCCACC TGGATCTGGG AGTCCGTGCT GGCATCCCGT
CCCTACATTG TGGGCATCAT GGTCAACATT GCGCGTGGCT ACGCCCAGCA GGGGGACAAC
GACAAGGCGT TTGCCTACCT GGCTCGCTGC AAAAAGCTGC AACCGCAGGC CGTTTCCGTG
CGCGCGCTGG AGGTGATCCT GCTGGGGCAC GTTGGCAACG AGGCTGAAGC CACGCGGCTG
GCAAAACAGT ACCTGAAAGA CGGTACTTAC AACTACGACC TGCTCAACGC AGCTTGGCTG
CTGGGCACAC AGAACAACGA CCCTGACCTG GCCATCGAGG CCATCAAGTT GCGCAACAAG
GGCTGGCCTG ACCAGGAGAT CGATGGATTG CTCAAACTGG GCGATCTCTT CGCGGCACAG
AAAAAGGATG ATGCCAGGGC GCTGGCATCC TACCGGGCTG CCCTGAAGGC CGCACCTCAC
AACCTGAGGG ACGCCGTCCG GCAGAGAATC CCGGCGGCCT ATCTGCCCAG GCTCTAA
 
Protein sequence
MSKKKRKIAG TSTAGEATPL ARPAGVPAAA ARNDWTVIIF ACMLFLVAAI GAPYEEMLQD 
TLKSIVVSFA ALGAGLLFFW RQRQRHEYFH WHALMGFPLA LMAYALGSMV WSHTYLAGVE
AIRWFIFSLL LWLGLNTFTR EKSPSLFWGI HAGAVVASLW TALQFWIDFR FFSQGPNPAS
TFVNRNFFAE YVVCTLPFSA LLIARAGKPQ EIAWLTFTTA FNIVALLMTG TRSALATLWV
LLFLVLPLAG FFYRRQLACF AWNLTQRLAV IALLLVTIVG LGLIHTGNPK IAGELNGRNA
LERGIFRTVS VVTDSDEFRT GSLSVRLTMW KATGRMIQDR PLSGVGAGAW EVNGPLYQTA
GSQLETDYYA HNEPLQLLAE YGLVGWLALA GLLGYLGLAA WRTLGDRRPE AMDEGPVRAA
ALACLLALLM VSNAGFAWRL ASTGALFAVL LGLLAASDAR LGYRGFSGGS RLPWHPVLSR
TAMWALAASL ALATYISQQA AESERKIIGA VKLALMISGS GNPGHPQWNQ TKKHMLRLIG
EGIAINPHYR KITPIVADEL ARWGDWKNAT WIWESVLASR PYIVGIMVNI ARGYAQQGDN
DKAFAYLARC KKLQPQAVSV RALEVILLGH VGNEAEATRL AKQYLKDGTY NYDLLNAAWL
LGTQNNDPDL AIEAIKLRNK GWPDQEIDGL LKLGDLFAAQ KKDDARALAS YRAALKAAPH
NLRDAVRQRI PAAYLPRL