| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2523 |
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| Symbol | |
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| ID | 4014828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2637412 |
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| End bp | 2639628 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637942186 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_549338 |
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| Protein GI | 91788386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0830151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00448531 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAAAGA AAAAAAGAAA GATAGCCGGC ACATCGACTG CCGGCGAGGC CACGCCCTTG
GCAAGGCCAG CCGGGGTACC CGCCGCCGCC GCGCGGAATG ACTGGACCGT CATCATTTTT
GCCTGCATGC TGTTTCTCGT GGCCGCCATC GGGGCGCCCT ACGAGGAAAT GCTGCAGGAC
ACCCTGAAGT CGATCGTCGT TTCATTTGCG GCGCTCGGCG CAGGCCTGCT GTTTTTCTGG
CGCCAGCGCC AGCGCCACGA ATACTTCCAC TGGCATGCCC TGATGGGCTT CCCGCTGGCG
CTCATGGCCT ACGCGCTGGG CAGCATGGTG TGGTCTCACA CCTACCTGGC AGGCGTAGAG
GCGATTCGCT GGTTTATTTT CAGCCTGCTG CTGTGGCTGG GCCTGAACAC CTTCACCCGG
GAAAAGTCAC CATCCCTCTT TTGGGGAATC CATGCGGGCG CCGTGGTGGC ATCTCTCTGG
ACGGCCTTGC AATTCTGGAT CGACTTCAGA TTTTTTTCTC AGGGGCCCAA CCCGGCTTCC
ACTTTTGTCA ACCGCAATTT CTTTGCGGAA TATGTCGTCT GCACCCTTCC ATTCTCGGCA
CTGCTGATCG CGCGGGCGGG CAAGCCCCAA GAAATCGCAT GGCTGACCTT CACGACCGCT
TTCAACATCG TGGCCTTGCT GATGACGGGA ACCCGCTCGG CGCTGGCAAC CCTGTGGGTG
CTGCTGTTCC TTGTTCTTCC GCTCGCCGGG TTTTTCTATC GCAGGCAACT GGCGTGTTTT
GCGTGGAACC TCACCCAGCG CCTGGCCGTG ATTGCCCTGC TGCTGGTCAC CATCGTTGGA
TTGGGTTTGA TCCATACCGG TAACCCGAAG ATTGCTGGAG AACTCAACGG ACGGAATGCG
CTTGAGCGCG GCATCTTTCG CACCGTCTCT GTCGTTACCG ACAGCGATGA ATTCAGGACG
GGCTCCTTGT CCGTTCGGTT GACCATGTGG AAGGCCACTG GCAGGATGAT CCAGGACCGG
CCATTGAGCG GTGTAGGCGC CGGAGCCTGG GAGGTCAATG GGCCGCTTTA CCAGACTGCC
GGCTCGCAGC TTGAGACCGA TTACTACGCC CACAACGAAC CTTTGCAGTT GCTGGCGGAG
TATGGCCTGG TGGGTTGGCT CGCCCTGGCA GGCTTGTTGG GCTACCTTGG CCTCGCCGCC
TGGCGCACCC TTGGCGACCG CCGGCCCGAG GCCATGGATG AGGGGCCTGT GCGTGCCGCG
GCGCTCGCCT GTCTGCTGGC ATTGCTGATG GTCAGCAATG CGGGGTTCGC CTGGCGGCTG
GCCTCCACTG GCGCGCTTTT TGCCGTATTG CTGGGCCTGC TTGCGGCATC CGATGCGCGG
CTGGGCTACC GGGGGTTCAG CGGTGGTTCG CGTTTGCCGT GGCATCCAGT TCTTTCCCGC
ACGGCCATGT GGGCCCTGGC GGCGAGCCTG GCACTGGCGA CGTACATCAG CCAGCAGGCG
GCGGAAAGTG AGCGGAAAAT TATCGGCGCC GTCAAATTGG CACTCATGAT TTCAGGCTCG
GGCAACCCCG GCCATCCGCA ATGGAATCAA ACCAAAAAAC ACATGCTGCG CCTGATCGGG
GAGGGCATCG CCATCAACCC CCATTACCGC AAGATCACGC CCATCGTGGC AGACGAACTG
GCGCGCTGGG GGGACTGGAA AAACGCCACC TGGATCTGGG AGTCCGTGCT GGCATCCCGT
CCCTACATTG TGGGCATCAT GGTCAACATT GCGCGTGGCT ACGCCCAGCA GGGGGACAAC
GACAAGGCGT TTGCCTACCT GGCTCGCTGC AAAAAGCTGC AACCGCAGGC CGTTTCCGTG
CGCGCGCTGG AGGTGATCCT GCTGGGGCAC GTTGGCAACG AGGCTGAAGC CACGCGGCTG
GCAAAACAGT ACCTGAAAGA CGGTACTTAC AACTACGACC TGCTCAACGC AGCTTGGCTG
CTGGGCACAC AGAACAACGA CCCTGACCTG GCCATCGAGG CCATCAAGTT GCGCAACAAG
GGCTGGCCTG ACCAGGAGAT CGATGGATTG CTCAAACTGG GCGATCTCTT CGCGGCACAG
AAAAAGGATG ATGCCAGGGC GCTGGCATCC TACCGGGCTG CCCTGAAGGC CGCACCTCAC
AACCTGAGGG ACGCCGTCCG GCAGAGAATC CCGGCGGCCT ATCTGCCCAG GCTCTAA
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| Protein sequence | MSKKKRKIAG TSTAGEATPL ARPAGVPAAA ARNDWTVIIF ACMLFLVAAI GAPYEEMLQD
TLKSIVVSFA ALGAGLLFFW RQRQRHEYFH WHALMGFPLA LMAYALGSMV WSHTYLAGVE
AIRWFIFSLL LWLGLNTFTR EKSPSLFWGI HAGAVVASLW TALQFWIDFR FFSQGPNPAS
TFVNRNFFAE YVVCTLPFSA LLIARAGKPQ EIAWLTFTTA FNIVALLMTG TRSALATLWV
LLFLVLPLAG FFYRRQLACF AWNLTQRLAV IALLLVTIVG LGLIHTGNPK IAGELNGRNA
LERGIFRTVS VVTDSDEFRT GSLSVRLTMW KATGRMIQDR PLSGVGAGAW EVNGPLYQTA
GSQLETDYYA HNEPLQLLAE YGLVGWLALA GLLGYLGLAA WRTLGDRRPE AMDEGPVRAA
ALACLLALLM VSNAGFAWRL ASTGALFAVL LGLLAASDAR LGYRGFSGGS RLPWHPVLSR
TAMWALAASL ALATYISQQA AESERKIIGA VKLALMISGS GNPGHPQWNQ TKKHMLRLIG
EGIAINPHYR KITPIVADEL ARWGDWKNAT WIWESVLASR PYIVGIMVNI ARGYAQQGDN
DKAFAYLARC KKLQPQAVSV RALEVILLGH VGNEAEATRL AKQYLKDGTY NYDLLNAAWL
LGTQNNDPDL AIEAIKLRNK GWPDQEIDGL LKLGDLFAAQ KKDDARALAS YRAALKAAPH
NLRDAVRQRI PAAYLPRL
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