| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1910 |
|---|
| Symbol | |
|---|
| ID | 4015430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1969916 |
|---|
| End bp | 1971232 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637941579 |
|---|
| Product | phthalate 4,5-dioxygenase, oxygenase subunit |
|---|
| Protein accession | YP_548741 |
|---|
| Protein GI | 91787789 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.578876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.581965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCT TTGAAGAAAA TGAGTTGTTG TGCCGCGTTG AGGGAAGCGC GCCCATGGGC
CAGTTGATGC GCCGCCACTG GACGCCGGTC TGCCTGATCG AAGAGGTTAG CGAGCCCGAC
GGCACCCCCA TCAAGGCCCA GGTGTTTGGC GAAGACCTGG TGGTGTTTCG CGACACCAAT
GGCCGCGTGG GCGTGATGGA CGAATACTGT CCGCATCGGC GCGTGTCGCT GGTGTTCGGC
CGCAACGAGG ACTGCGGCCT GCGCTGCCTG TACCACGGCT GGAAAATGGA CGTCGAGGGC
AATGTGCTGG AGATGGTCTC GGAGCCCGCG GCCAGCGGCA TGGTGCAAAA GGTCAAGCAT
CTGGCCTATC CCACGCGGGA GTGGGGCGGT TTTGTGTGGG CCTACATGGG CCCGCCCGAC
ACGCTCCCCG AATTCGAGCC GCCGGCCTGG GCTCCCACTG CAGACACTCA GGTAACGATT
GCCAAAGTCA TCATTCCCTG CAACTGGGCG CAGATCCTGG AGGGGGCCAT TGACTCGGCG
CACAGCTCCA GCCTGCATTC ATCAGACATG GTGCCCGCCC GCGTTGACAC AGCCAAGGCA
ACCGACACCA ACTGGCTGCG GCCGTCCACC GACAAGGCGC CCCGCCTGCA GGTGGAGCGC
GGCTCTTATG GTTTCCGGTA TGCGGCCATA CGCCGGCCCA TCAGCAACGC GGCCACGAGC
GATTACGTCC GTTCAACCGT CTTCGTGGCA CCAGCCACGG CCCTGATTCC GCCCAACAAC
CTGTACAACG TCGCCAATAT CAATGTGCCT ATGGACGACA CCCACACGGC GTTTTACTTC
ATCGCCTGGG GTCATCCCTC CCAAACCCCG GAAACCGCCA CCTGGCGGAA GTTCCTGGGC
CAGCAGATCG GGATTGACCT CGATGAAAAC TACATGCCGC TGCGCAACCG CGGCAACCAT
TTCTGGCAGG ACCGCGCCGC CATGAAGGCG GGCAACTTCA CCGGCATCAC CGGTTTCCCC
AACCAGGACA TTGCAATGTG GGTGACCATG GGGCCCATTG CCGACCGCAC CCATGAGCGG
CTGGGCGCCA GCGACCTGGC TGTGGTGGAG TTTCGCAAAC AGATGCTGGA GGCGGTGCGT
GCATTCCAGG CCGGCGAGAC CGCCATCGGT ACGGGTGATG CCCGCGTTCC AGCCAGCGTC
TGTGCGTTTC AGGCCATCGT TCCCAAAACC ACCGATTGGC GCGCATTCCC TGCGACCCAT
GTCTGGGACT CCAGCGAGCC CGCACTGGAA CCTTCCTATT CCACGTCCGC CCAGTAG
|
|---|
| Protein sequence | MLTFEENELL CRVEGSAPMG QLMRRHWTPV CLIEEVSEPD GTPIKAQVFG EDLVVFRDTN
GRVGVMDEYC PHRRVSLVFG RNEDCGLRCL YHGWKMDVEG NVLEMVSEPA ASGMVQKVKH
LAYPTREWGG FVWAYMGPPD TLPEFEPPAW APTADTQVTI AKVIIPCNWA QILEGAIDSA
HSSSLHSSDM VPARVDTAKA TDTNWLRPST DKAPRLQVER GSYGFRYAAI RRPISNAATS
DYVRSTVFVA PATALIPPNN LYNVANINVP MDDTHTAFYF IAWGHPSQTP ETATWRKFLG
QQIGIDLDEN YMPLRNRGNH FWQDRAAMKA GNFTGITGFP NQDIAMWVTM GPIADRTHER
LGASDLAVVE FRKQMLEAVR AFQAGETAIG TGDARVPASV CAFQAIVPKT TDWRAFPATH
VWDSSEPALE PSYSTSAQ
|
|---|
| |