Gene Bpro_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0403 
Symbol 
ID4011582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp414171 
End bp414908 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID637940088 
ProductABC transporter related 
Protein accessionYP_547265 
Protein GI91786313 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.3347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC CCCTGATCAC CGTGGAAAAC GTCAACAAAC GCTTTGGTGC CCACCATGTG 
CTGCGCGACG TTTCCACGCA TTTCGAAGCC GGCCAGGTCA CCGTGATCGT GGGCGCCTCC
GGTTCGGGCA AGAGTACGCT GCTGCGCATG CTGAACCGGC TGGAACGGCA CGATTCGGGC
CGCATCCGGG TCGATGGCAT CGAGGTGGAC GACGACCTCA CGCACCTGGA CGCCCTGCGC
CGCGAACTCG GCATGGTGTT CCAGCAGTTC AACCTGTTCC CGCACCTGAC GGTGCTAGAC
AACGTGGCGC TGGCGCCGCG GCGGGTGCGC AAGACTCCGC GCAGCGAGGC CAGTGCCCAG
GCGATGGACT TGCTCAGGCG GGTGGGCATG GAGGCGCATG CGCACAAGTA CCCGTTTGCA
CTGTCCGGTG GCCAGCAGCA GCGCGTGGCG ATCGCGCGGG CGCTGGCGAT GCAGCCCAAG
GTGATGCTGT TCGACGAACC CACCTCGGCG CTGGACCCGG AAATGGTCAA GGAAGTGCTG
GATGTCATGA AGCAGCTGGC CCAGTCGGGC ATGACCATGG TCATCGTCAC GCACGAGATG
GGATTTGCCC GCGAAGTGGC CGACCGTGTG CTGTTCATCG ACCAGGGGCA GGTGGCGCAG
GACGCGCCGC CGGCCGAGTT CTTTGGCGCG CAGGCCAACC CGCGCATCCG GGCCTTTCTG
GGCCAGGTGA TCCACTGA
 
Protein sequence
MSTPLITVEN VNKRFGAHHV LRDVSTHFEA GQVTVIVGAS GSGKSTLLRM LNRLERHDSG 
RIRVDGIEVD DDLTHLDALR RELGMVFQQF NLFPHLTVLD NVALAPRRVR KTPRSEASAQ
AMDLLRRVGM EAHAHKYPFA LSGGQQQRVA IARALAMQPK VMLFDEPTSA LDPEMVKEVL
DVMKQLAQSG MTMVIVTHEM GFAREVADRV LFIDQGQVAQ DAPPAEFFGA QANPRIRAFL
GQVIH