Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0403 |
Symbol | |
ID | 4011582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 414171 |
End bp | 414908 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940088 |
Product | ABC transporter related |
Protein accession | YP_547265 |
Protein GI | 91786313 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.3347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAC CCCTGATCAC CGTGGAAAAC GTCAACAAAC GCTTTGGTGC CCACCATGTG CTGCGCGACG TTTCCACGCA TTTCGAAGCC GGCCAGGTCA CCGTGATCGT GGGCGCCTCC GGTTCGGGCA AGAGTACGCT GCTGCGCATG CTGAACCGGC TGGAACGGCA CGATTCGGGC CGCATCCGGG TCGATGGCAT CGAGGTGGAC GACGACCTCA CGCACCTGGA CGCCCTGCGC CGCGAACTCG GCATGGTGTT CCAGCAGTTC AACCTGTTCC CGCACCTGAC GGTGCTAGAC AACGTGGCGC TGGCGCCGCG GCGGGTGCGC AAGACTCCGC GCAGCGAGGC CAGTGCCCAG GCGATGGACT TGCTCAGGCG GGTGGGCATG GAGGCGCATG CGCACAAGTA CCCGTTTGCA CTGTCCGGTG GCCAGCAGCA GCGCGTGGCG ATCGCGCGGG CGCTGGCGAT GCAGCCCAAG GTGATGCTGT TCGACGAACC CACCTCGGCG CTGGACCCGG AAATGGTCAA GGAAGTGCTG GATGTCATGA AGCAGCTGGC CCAGTCGGGC ATGACCATGG TCATCGTCAC GCACGAGATG GGATTTGCCC GCGAAGTGGC CGACCGTGTG CTGTTCATCG ACCAGGGGCA GGTGGCGCAG GACGCGCCGC CGGCCGAGTT CTTTGGCGCG CAGGCCAACC CGCGCATCCG GGCCTTTCTG GGCCAGGTGA TCCACTGA
|
Protein sequence | MSTPLITVEN VNKRFGAHHV LRDVSTHFEA GQVTVIVGAS GSGKSTLLRM LNRLERHDSG RIRVDGIEVD DDLTHLDALR RELGMVFQQF NLFPHLTVLD NVALAPRRVR KTPRSEASAQ AMDLLRRVGM EAHAHKYPFA LSGGQQQRVA IARALAMQPK VMLFDEPTSA LDPEMVKEVL DVMKQLAQSG MTMVIVTHEM GFAREVADRV LFIDQGQVAQ DAPPAEFFGA QANPRIRAFL GQVIH
|
| |