Gene Bpro_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0356 
Symbol 
ID4011610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp372719 
End bp373447 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content54% 
IMG OID637940040 
ProductABC transporter related 
Protein accessionYP_547218 
Protein GI91786266 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.435146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATG TTAAAGATCT GAAAGTCAGC TACGGCGAGG TTCCCGCATT GCGCGGCGTC 
TCACTTGTCG TCAAGAAGAA CGAAATTGTC ACCGTGATCG GCGCCAACGG AGCGGGCAAG
TCCACGCTGC TCAGGACCAT CTCCGGACTT TCCAAAGTCA AAGGCGGGAC CATTGAGTTT
GATGGAATTG CGGTGGGATC AAAGCAGCCA CAGGACGTGG TGAAACTTGG TATTGCCCAC
GTGCCCGAAG GGCGGCATGT ATTTCCCTTG CTGAGTGTTG AGGACAACCT CAAAGTGGGC
GCTTATTTGA ATCGTCGAAA GCAGGTCATT GCGGAAGACC TCGACCGCGC TTTTTCGATG
TTTCCACGCC TTGCTGAGAG ACGCCATCAG GCGGCGGGAA CTCTGTCTGG CGGAGAGCAG
CAAATGCTCG CGCTGGGTCG AGCCATGATG ACTCGCCCGA GGCTTCTTCT TCTGGATGAG
CCGTCTCTGG GTCTGGCCCC AAAAATCGTC GATGAAGTTA TCCAGACGAT TGTGAAGTTT
CGCAGCGAGG GCGTCACCAT TCTTTTGGTG GAGCAAAACG CCAACCTCGC CTTGGCTATT
GCTGACAGAG CCTATGTGAT GACCTTGGGC CAGGTCACCC TGTCTGGAAG TGCCAGCGAA
GTGCAGGCTG ATCCTGCCGT TAGAGCTAGT TATTTGGGCG AAATTGCAAA CGATTGCATG
AAAGATTGA
 
Protein sequence
MLDVKDLKVS YGEVPALRGV SLVVKKNEIV TVIGANGAGK STLLRTISGL SKVKGGTIEF 
DGIAVGSKQP QDVVKLGIAH VPEGRHVFPL LSVEDNLKVG AYLNRRKQVI AEDLDRAFSM
FPRLAERRHQ AAGTLSGGEQ QMLALGRAMM TRPRLLLLDE PSLGLAPKIV DEVIQTIVKF
RSEGVTILLV EQNANLALAI ADRAYVMTLG QVTLSGSASE VQADPAVRAS YLGEIANDCM
KD