Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0285 |
Symbol | |
ID | 4011693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 301134 |
End bp | 301934 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637939969 |
Product | extracellular solute-binding protein |
Protein accession | YP_547148 |
Protein GI | 91786196 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.994895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACGA TTCATTGGCT GATGACCGGG ATACTTGGGC TGGTGCTGGC GGGCTGTGCG GGCATCAGTA CCGCCCCCAC AGCGCAAGCG CGACAGGCTT TGGCTCCGAC CGGCAAGCTT CGCGTTGGGC TCTTGCTTGG CAGCCCCACA CACGTGATCA AGGATGCCGT GTCGGGTGAG ATGAAAGGGG TGGGATTTGA CCTCGGAAAA GAGTTGGCCC GGCGCATGGG GGTTCCGTTT GATCCGATCA TTTACCCGTC GATCCCGGCC CTTCTCGACA GCGGAAAAGC CGGCCATTGG GACGTCACAT TCATCGGGGT CACGCCCGGG CGCGCGAAGG ATTTCGATTT CGCCCCGACG CACCTGGAAG TCGAATTCGG CTACCTCGTC CCCGGCGGTT CTTCCATCTC AACCATGGCT GATGTGGATC GCCCCGGCGT TCGAGTGGCC TTGCAGGAGA GGTCCGGCCC GGATGTCTTC TTTTCACCGC TGCTAAAAAA TACCGTGCTG GTCCGGGCAT CAAGCAATCC TGGCACATTG GATCTGCTGA AATCCGGGAG GGCAGACGTC ATGGGCAGCA TCAAGCCCAT CCTGTTCGAA TTGTCGAAGG AGTTGCCTGG TTCCCGGGTT CTCGACGGTC GGCCTGGCAT CGATCCGCAC GCCATGGCGA TGCCGAAGGG ACGGGACCCC GGCGTGACCT ATGCGCGCAA ATTCATTGAG AACGCAAAGT CAGAGGGGCT GGTCAAGGCG GCGATCGAGA GGGTCGGAAT GCGCGGCGCC CTTGTGAGCA CCACGCAATA A
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Protein sequence | MRTIHWLMTG ILGLVLAGCA GISTAPTAQA RQALAPTGKL RVGLLLGSPT HVIKDAVSGE MKGVGFDLGK ELARRMGVPF DPIIYPSIPA LLDSGKAGHW DVTFIGVTPG RAKDFDFAPT HLEVEFGYLV PGGSSISTMA DVDRPGVRVA LQERSGPDVF FSPLLKNTVL VRASSNPGTL DLLKSGRADV MGSIKPILFE LSKELPGSRV LDGRPGIDPH AMAMPKGRDP GVTYARKFIE NAKSEGLVKA AIERVGMRGA LVSTTQ
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