Gene Bphyt_7399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7399 
Symbol 
ID6280616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010679 
Strand
Start bp114899 
End bp115654 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID642619578 
Productzinc metalloproteinase Mpr protein 
Protein accessionYP_001893613 
Protein GI187922024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA GCCAACCCAC CATCGCCATG TCGGCCGAAC TTCAGGCTGC GTTCGATCAC 
TTCAACGCCG AACTGTTCGA AGCGCGTCTG CCGCCGACGC TTATTACCCT CCAACGACAT
CGACTGACGC CAGGGTTTTA TACCCCGGAC GGCTGGGTGA ACCACCGCGA CGGGCAGGAA
CGAGCTGACG AGATTGCGCT GAACCCGCGC TACTTCGCGG TCCAGACACT GAACGAGAGC
ATGAAGGCGC TCGTGTTGCA GATGACCTTT GTCTGGCAAC GCCACTACGG TAAGCCCGGC
CGGCGTCGCT ATGCGAACAA GGAGTACGGC GAGAAACTGG TTTCCATCGG CCTTCAGCCG
AGCCACAACG GTAAGCCTGG CGGCCGGACG GTCGGAGAGA AAATCGACGC CTTCGTGATT
GAGGGCGGCC TGTTCGAGCG AGGGTGCGCA AAGCTCCTGA CCAAAGATTT CACTCTGTCG
TGGCTCGACC GCTTTCCCGT CACGCTGAAG CAGCTCGCGA AGACTCTGCA CCAGTTGCCC
GAAGAAACCC GCACTGCGCT TGATGCAGAT GAGCTTGCTG CGCTGGACAT CCAGATCGCT
GAAGGAGAGC GGCCTACCGC GAGCCAGGTG CGATACCACT GTCCAGTGTG CTTCCGCAAG
GTGTGGGGAA AGAAGGGTCT CGAAGGCGAG CTGGCCCATG TGCCATGCCA GCAAGTCCTT
GTGATCGGCG ACATACCTGA CGACAAAGAA ACCTGA
 
Protein sequence
MIVSQPTIAM SAELQAAFDH FNAELFEARL PPTLITLQRH RLTPGFYTPD GWVNHRDGQE 
RADEIALNPR YFAVQTLNES MKALVLQMTF VWQRHYGKPG RRRYANKEYG EKLVSIGLQP
SHNGKPGGRT VGEKIDAFVI EGGLFERGCA KLLTKDFTLS WLDRFPVTLK QLAKTLHQLP
EETRTALDAD ELAALDIQIA EGERPTASQV RYHCPVCFRK VWGKKGLEGE LAHVPCQQVL
VIGDIPDDKE T