Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7007 |
Symbol | |
ID | 6277800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3384399 |
End bp | 3385481 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642618030 |
Product | integrase family protein |
Protein accession | YP_001890666 |
Protein GI | 187921634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.436087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCTC CCCATCTGAC CGACCCGGTC CCTCGTCCTG CGCCGTCCAC GGATCTCTTC GATCAGCAAC GTGAAGACTG GCGTCGCGAC CCGCAAATTG CTTTCGACGC CTGGCTTGCC AAACAGAATT TCCGCCGTTC CTCCGCCGAA GTCTACCAGG CGCAATGGGG GCTTTTTCTC GAATGGCTGA GCGTGCGCCA GAAAAGTCTC GCCACGGTCG ATGCTCACGC GATTGCCGAG TTCGTCGCTG GTCTCGACGT GAAAAAGACC CAAAGGGTGC GGTATTTAAG GCTAATCGAA CGGGTGCTCG ATCATGTGCG CGAAATCGAA TCCGCTTCGA CCAATCCGGC GCGCTTCATT GCTCAGGATG GCGAAGCAGC GTGGCGGAAC GCACGCGATA ACGAGCCGAC CGGCTTTCTC AACCACGCTG AACGAACGGC GCTGATCGCG CATCTGTTTT CGCCGCTGCC GGATTTGTCC GCGGCGCAAC GTTGGCGGGA GCGGCGCGAC CGCGCTTTGA TCGCTGTGTT TCTAGGTGGC GGATTGAAGA CGGGCGAAGC TGCAGCGCTT ACGGTTAGTT GCGTGCATGC CGGAATGCCG TGGGTGACGA TCGAGTCAGC TAACCCGATG CTCACACGGC GCACCCGGCT CGCGCCCTTC GCCGCAGCCA TTCTCGACGC GTGGCTTGCG GAACGGCGGT TGTCGGAACT GGCGGGCAAC CTGGTATTTC CCGCATCGCC TTCCGGAAGG CCCATGCATA AAGCGACCAT GCTGCGCGCG GTCGACGCCT TGATCGATGG AGCCGGAATC GCAGAATCGC GGGCATCGCG TGCCAGTCCG CAAACATTGC GGAATACGTT CGCGGCGGAT CTGTTCGAAA GTGGAGTCGA GGCGGAACTG GTCGGGCAAT GGCTGGGATT TGTGCAGGCC GTGTCGGCGA ACCGTCTGTA TCGAGCGTGG CAAAACTGGA TGGATCATCA GGATTCTCCC GCCACCGACG TTCCGGATCC GGCGGTTCCG CCCTTAGCCA CACCTAGACG CGACGGGCGT TTGACGAGGA AAAGGGGAGC CGTCGACTCC TGA
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Protein sequence | MSPPHLTDPV PRPAPSTDLF DQQREDWRRD PQIAFDAWLA KQNFRRSSAE VYQAQWGLFL EWLSVRQKSL ATVDAHAIAE FVAGLDVKKT QRVRYLRLIE RVLDHVREIE SASTNPARFI AQDGEAAWRN ARDNEPTGFL NHAERTALIA HLFSPLPDLS AAQRWRERRD RALIAVFLGG GLKTGEAAAL TVSCVHAGMP WVTIESANPM LTRRTRLAPF AAAILDAWLA ERRLSELAGN LVFPASPSGR PMHKATMLRA VDALIDGAGI AESRASRASP QTLRNTFAAD LFESGVEAEL VGQWLGFVQA VSANRLYRAW QNWMDHQDSP ATDVPDPAVP PLATPRRDGR LTRKRGAVDS
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