Gene Bphyt_6879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6879 
Symbol 
ID6280364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3240547 
End bp3240897 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content61% 
IMG OID642617906 
Productprotein of unknown function DUF192 
Protein accessionYP_001890542 
Protein GI187921510 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.364681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.213508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTGG CACGCCTTTA CATTCGCGGA CGCGACATCG GCGTCGACGT GTCGATCACC 
GAGACCGCGC AGGAACGCAT GCGTGGTTTG CTGGGCCACG ATGCGCTCGC CCCAGATCAA
GCGCTGCTAT TGCGGCGATG CGGTTCGATC CACACGTTCG GCATGCGCTT TGCCATCGAC
GTGCTGTTTC TCGATCGGCA ACTACGTGTC GTTGCGATCA ATCACGACGT GCCAAGACGG
CGAATGCGGT TCAGTCTGCG CGCGGCTCAT ACCCTGGAGA TGGCGGCCTG TGCAGCGCGT
TTGCACGGAC TGGCTGTTGG TGATTCACTT GTTTTCGAGG CGGCCTCGTG A
 
Protein sequence
MKLARLYIRG RDIGVDVSIT ETAQERMRGL LGHDALAPDQ ALLLRRCGSI HTFGMRFAID 
VLFLDRQLRV VAINHDVPRR RMRFSLRAAH TLEMAACAAR LHGLAVGDSL VFEAAS