| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5796 |
|---|
| Symbol | |
|---|
| ID | 6277443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2000711 |
|---|
| End bp | 2001406 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642616860 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001889503 |
|---|
| Protein GI | 187920471 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0628742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.659893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG CTGGAACTGG CGTCGTTGCA ATCTGGCATG ACCTGCTGCC GGAAGCGAAG
GATGAATTCT ACGAGTGGCA CAACCGTGAG CACATGCCCG AACGCGCCGG GATCCCCGGG
TTCAGGCGCG GTCGGCGTTT CATAGCACTG GATGCGGGTC CTGAGTACTT CAATCTTTAC
GAGGCCGACA CGGTCGAGGT TCTTGGCGCG CAAGACTACC TTTCTCGACT CAATACGCCG
ACGCCGTGGA CCCGGCAGGT GGTCGCCTCG TTTCGCAGCG TCGCGCGCTC GATCTGTCAC
GTCGCCTATT CGGACGGTGT AGGGCAGGGT AGCTATCTCA TGACTGTGCG CTTCGACGTG
CCCTCGGATG CAAGGGCAGA CGTCGTGAAG GGTTTGCGTC AGGGCGTGCT GCCTTCCCTC
GTGGATCTGC GGGGTATCAC GGGCGTGCAT CTGTGCCTTG CCGACGAAGC GATCAGCAAG
GTGGAAACGG CGGAGAAGAA GGCGCGTTCA GAAGGCACGC AGGTACCTAC ATGGATCGTG
TTAGTCGAAG GGTGCCGGGC AGACTATGTC CGTTCAGCGG TGGACCGTTT AGTTTCGGGA
CTCGCGTCAT TGCCCCAACC CGGCGCAACG ACACCGGACA CGACGCTCTA TCAACTTGAG
TACACGCGCT GCAAAACGCC CTGGAGCGCT GGCTAA
|
|---|
| Protein sequence | MSLAGTGVVA IWHDLLPEAK DEFYEWHNRE HMPERAGIPG FRRGRRFIAL DAGPEYFNLY
EADTVEVLGA QDYLSRLNTP TPWTRQVVAS FRSVARSICH VAYSDGVGQG SYLMTVRFDV
PSDARADVVK GLRQGVLPSL VDLRGITGVH LCLADEAISK VETAEKKARS EGTQVPTWIV
LVEGCRADYV RSAVDRLVSG LASLPQPGAT TPDTTLYQLE YTRCKTPWSA G
|
|---|
| |