Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5702 |
Symbol | |
ID | 6277479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1905165 |
End bp | 1905686 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616775 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001889418 |
Protein GI | 187920387 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.947024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.758266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAGAA AATACAAGGT GCTGTTTCTC TGCCGCGAGA ATTCAGCACG CAGCATCATT GCCGAAGCTT TGTTGCGGGA ACTGGCGGGC CACCGGTTCG ACGCGTTCAG CGCGGGACCG GAACCGGCCG CGCGGGTTCA TCCGTGCGCG GTCGCGCAAT TGCGGCCAGG CATCTCGGAC CTCGGCATTC TCAGTCCGAA AAGCTGGCTG GAATTCACCG GTGAATGGGC GCCGCGTATG GACCTCGTCG TCGCGCTGGA CGAATCCGTC GACACCCGCC ACGCACCCGT ATTTCCAGGC GAGCCCGCCT CATGCACCTG GACCTTCGCC GATCCGCTCG CACACGACAT TGCCGAGTCC GAACGCGCGC GCGTGTTCGA GAAAGTGTTC TGGCAAATCG TGCGGCAGAT GAGCGCGTTT ATCGAACTGC CGCAATATGC AACGCCGGCT GGCGCTGTGG CAACGGCCGT GATTCCCGCA TTGAGTGCAT CTTCGCAGCG CGTCACGACA TGTGACGCGT GA
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Protein sequence | MTRKYKVLFL CRENSARSII AEALLRELAG HRFDAFSAGP EPAARVHPCA VAQLRPGISD LGILSPKSWL EFTGEWAPRM DLVVALDESV DTRHAPVFPG EPASCTWTFA DPLAHDIAES ERARVFEKVF WQIVRQMSAF IELPQYATPA GAVATAVIPA LSASSQRVTT CDA
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