Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5633 |
Symbol | |
ID | 6280139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1837225 |
End bp | 1838262 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616707 |
Product | ABC transporter related |
Protein accession | YP_001889350 |
Protein GI | 187920319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.20666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA TCCAGTTGCG CAATGTGTCG AAACGGTTTG GCGATATCGT CGCGGTCGAC GATCTTTCTA TCGACGTGAT GGACGGCGAG TTCGTGGTGC TGCTCGGGCC GAGCGGTGCG GGCAAGACCA CGACGCTGCG TCTGATCGCC GGGCTGGAGC GGCCGGACGC GGGCGACGTG CTGATCGACG GTGGCATTGC GACCGGCGTG CATCCGTCCG ATCGCGACGT CGCGTTTATC TTCCAGCAAT ATTCGCTGTA TCCGCATCTG ACCGTGTTCG GCAACCTGGC GTTTCCGTTG CGCTCGCCAA GAAGGCGCAG CAGCGAGGCG GAGGTGCGTG CCCGCGTTCA CGCGGTCGCG GAGATGCTGC ACATGGAATC GAAGCTCGAC AACATGGCGA CGCATCTGTC CGGCGGCGAA ATGCAGCGCG TGGCGATAGG GCGCGCGCTC GTGCGGCAAC CCAAGGTGTT TCTGATGGAC GAGCCGCTGT CGTCGCTCGA TGCGAAGCTG CGTGAAGAGT TGCGCATCGA ACTCAAGCGC CTGCATCGTG CGATCGGCGC GACGATCATC TACGTCACGC ACGATCAGGT CGAAGCCACC ACGCTCGCGG ATCGCATCGG CATTCTTGAC CAGGGGCGTC TCGTGCAACT CGGCACGCCG CGCGAGGTGT ATGGCAATCC GGTGTCGCTG AGCGCTGCGC AGCGGCTCGG CTCGCCGCCG ATCAACCTGC TGCCACCCAC GCTGCTCAAT TTGGCTCACA TACCGGCGGG AACGACAACT GTCGCTATCC GTCCTGAGGA TATCGTGCTG CATGACCCTG ATGTGGGCGA TGCGCGTGGC GTACAGGACG CACTGAATCT GACGGTGCTC GAATATTCGC CGCTACGCCA TCTGCTGATT CTCGATCGCG CGGGAACCGC AGTCGTGGTA ACGACCGTGG CGGAGCGCAA TTTCTCGCCG GGACAATCGG TCGGTGTGTC GCTGCCGGCG CGCAGCCTTT TATATTTCCG TGCCGACGGC AGGAGAATCC CGACATGA
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Protein sequence | MAEIQLRNVS KRFGDIVAVD DLSIDVMDGE FVVLLGPSGA GKTTTLRLIA GLERPDAGDV LIDGGIATGV HPSDRDVAFI FQQYSLYPHL TVFGNLAFPL RSPRRRSSEA EVRARVHAVA EMLHMESKLD NMATHLSGGE MQRVAIGRAL VRQPKVFLMD EPLSSLDAKL REELRIELKR LHRAIGATII YVTHDQVEAT TLADRIGILD QGRLVQLGTP REVYGNPVSL SAAQRLGSPP INLLPPTLLN LAHIPAGTTT VAIRPEDIVL HDPDVGDARG VQDALNLTVL EYSPLRHLLI LDRAGTAVVV TTVAERNFSP GQSVGVSLPA RSLLYFRADG RRIPT
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