Gene Bphyt_4989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4989 
Symbol 
ID6280445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1127985 
End bp1128788 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID642616075 
ProductPeptidase M23 
Protein accessionYP_001888723 
Protein GI187919692 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0293299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0646806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT GTTCGTCCCG TTTTGCCAGA TCGGGCTCTT CCATACTATT CGCGTTGTTG 
CTGGCCGCGT CGTTGACAAG TTGTGCATGG CTCGCGCCGC CGGCACGTCC GACCCATGTC
GACGAGGCGC CGCCGCCCGC GGCTGCATTC TCGAATGCGC CGACGCCGGT GCCCACTTCG
CAAATTCCGG CGGGCTTCTA CCGCGTCAAT CCCGGCGACA CGCAGATCGG CGTCGCCAAG
GCGTTCGGTC GCGAGCCTTC GGCGCTCGCG CAGTGGAACC ACTTGTCGTC CACCGACGGT
CTGCGCGTCG GCCAGATGCT GCGGGTCGCG CCACCGCTGG TTGCCGTCAC ATCGTCCGCG
ACCGGCACGC CTTCGAATTC GCTTGAACAG GCGCGCGCCA TCTTCGCGGA TGGCCCGAGT
GAACCCGCGT CCGCAAAGGC TCGACTCGCA TGGCCGGTGA GCGGTCAGGT GAGCGCGCCG
TTCGTGTTGG GCAAGACCAA GGGGATCTTG ATAGGCGGGC GCGTCGGCGA ATCCGTGCGG
GCTTCGGCGG GCGGCCGCGT TGTGTACGCG GGCGGGCGCA TCGCGGCGTA CGGCAAGCTG
ATCATCATCA AGCACGACGC CCATCTGTTG ACGGCATACG GCAACAACCG CGCGCTGCTC
GTCAAGGAAG GCGCGGACGT CAAGGCTGGC GAGGTGATCG CCGAAATGGG CGCGGACGAC
AAAGGCCAGG CGTCGCTGCG CTTCGAAGTG CGCACGGACG GCAAACCGGT CGATCCGCTC
AAGTACCTCC CGCAACGCCA GTAA
 
Protein sequence
MKTCSSRFAR SGSSILFALL LAASLTSCAW LAPPARPTHV DEAPPPAAAF SNAPTPVPTS 
QIPAGFYRVN PGDTQIGVAK AFGREPSALA QWNHLSSTDG LRVGQMLRVA PPLVAVTSSA
TGTPSNSLEQ ARAIFADGPS EPASAKARLA WPVSGQVSAP FVLGKTKGIL IGGRVGESVR
ASAGGRVVYA GGRIAAYGKL IIIKHDAHLL TAYGNNRALL VKEGADVKAG EVIAEMGADD
KGQASLRFEV RTDGKPVDPL KYLPQRQ