Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4891 |
Symbol | |
ID | 6278383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1014919 |
End bp | 1015704 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615977 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001888625 |
Protein GI | 187919594 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.164408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.287477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGA TTCCGTCCGA CGATCGAAAG GTGAAAAGCG CGCTGCCTGA TACGACTGCC GTGAAGGTCC GCAAGGCGCG TTCCGCGCCA GGGCGGAGTG CCGAAGCCCA AGCAGGCGTA TCGTCGATAA AACCGGCGGC GCCCACGCGG CGTCCGGGCA GACCTTCCGG CGCCGCGCGC GGACCGGAGC AGCGCAACCG CCTGCTCGAC GCCGCGCTCG TGCTGTTCGC GCGGCAGGGC ATCGTCGACA CCACGCTCGG GGAGATCGCC CGCGAGGCAG GTTTTACGCC GGCGATGATG CATTACTACT TCAAGACGCG CGATCAACTG CTCGACGTGT TGATCGACGA ACGTTTCGCG CCGCTGCGCG CGGGGCTCGG CGTGCCTTTC CAGGAGAATC CCGACGACCC GGTTGCGGCT ATCACGCAGC TCGCGCAGCG GCTCGTGCAG GTGGCCGCCG AGCATCCGTG GTTTCCGTCG CTGTGGGTGC GCGAAGTGAT CAGCGACGGC GGCCTGTTGC GCCAGCGTAT GCACGAGCGC TTCGGCAACG CGCATCAAAA GGCGTCGCTG TCGGCTATCG CCCGGTGGCA GAAGGAAGGG CGGCTGAACG CAGAGCTGGA ACCCGCGCTC GTCTTCGTCA CGTTACTTGG ACTGACGATT TTGCCTCTGG CCACGTCGAA GCTGTGGTGC AACGATCCGC TTCGCCGCAA TATCGGTGGC GCGGAAATCG CGCGGCATGC GGTGGCTTTG CTGGTGCAGG GTATTGGTCC GAAGAAGGCC AATTGA
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Protein sequence | MARIPSDDRK VKSALPDTTA VKVRKARSAP GRSAEAQAGV SSIKPAAPTR RPGRPSGAAR GPEQRNRLLD AALVLFARQG IVDTTLGEIA REAGFTPAMM HYYFKTRDQL LDVLIDERFA PLRAGLGVPF QENPDDPVAA ITQLAQRLVQ VAAEHPWFPS LWVREVISDG GLLRQRMHER FGNAHQKASL SAIARWQKEG RLNAELEPAL VFVTLLGLTI LPLATSKLWC NDPLRRNIGG AEIARHAVAL LVQGIGPKKA N
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