| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4856 |
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| Symbol | |
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| ID | 6277526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 976468 |
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| End bp | 977304 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615943 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001888591 |
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| Protein GI | 187919560 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.188052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.482057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TTGCTCTGAG TGGAGCCGGT GGCCAGCTAG GCTCCGTGGT ACGCGCCGCG
TTGATCGCGC GCGGCACGCC GCTGCGTTCG GCAGCGGGCT CGAAGGCGCT CGTGCCGCTA
GTGGATGGCG AGGACGTGAT GCACGGCGAC CTGCGCGATC CGGCGGTCGT GGATCGTCTG
CTGGAAGGCG TCGACGTCCT GATCCATTTC GCGGGCACGA GTGTGGAGCG TCCGCTGCCC
GAGATCATCG AAAACAATCT GCGCGGGCTC GTCGAAGTGT ACGAAGGCGC GCGCCGGCAA
GGCGTGAAGC GCATCGTGTT CGCGAGCTCC AATCACGCGA TTGGCATGTA TCCGGTCACC
GAGCATCTGA GCCTCGATTG CGAACTGCGC CCGGACGGCT TTTACGGTCT GAGCAAGGTG
TGGGGCGAAG CGCTCGCCAG AATGTATTGG GACAAGCACG GTATCGAGAG CGTGTGCGTG
CGCATCGGCA GTTGTCTCGA ACGGCCGACC GAACCGCGGC ATCTCAGCAC CTGGTTCGGT
CATCGCGATC TGCTGCATTT CCTCGACCGT TGCGTCGAAG CGGAGAACGT AGGTTTCCTG
ACCATCTGGG GCGTCTCGGC CAACACGCGC AGCTGGTGGG ACAACAGCGG CGCCGAACGT
CTGGGCTATC AGCCGACGCA GGACGCCGAG GTCTACGCCG AAGAAATTCT CGCGCGGCCG
AATCCGCTCG ACGCGCTGGG CCAGCGCTTC CAGGGCGGCA GCTTCGTGGG TATCGATTAT
TCGCGCGATG ACGCCGCTGC GGACGGCTCG GCCGCTTCCG CCACGCGGCC TGTTTGA
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| Protein sequence | MKKIALSGAG GQLGSVVRAA LIARGTPLRS AAGSKALVPL VDGEDVMHGD LRDPAVVDRL
LEGVDVLIHF AGTSVERPLP EIIENNLRGL VEVYEGARRQ GVKRIVFASS NHAIGMYPVT
EHLSLDCELR PDGFYGLSKV WGEALARMYW DKHGIESVCV RIGSCLERPT EPRHLSTWFG
HRDLLHFLDR CVEAENVGFL TIWGVSANTR SWWDNSGAER LGYQPTQDAE VYAEEILARP
NPLDALGQRF QGGSFVGIDY SRDDAAADGS AASATRPV
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