| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4505 |
|---|
| Symbol | |
|---|
| ID | 6277554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 573969 |
|---|
| End bp | 575411 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642615595 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001888248 |
|---|
| Protein GI | 187919217 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCCA TTCCGACCGC CTGCGTGTCC GCGATGTTCG TGGTGTTCGG CCTATACGTA
CTGATTACGC AAGGCGCGAC GCGTTTATTC ACGCCGTTCA TCCTGATGTG CGTCTCGACC
TTCGCGTGGC AAGGCGCATG GACACTGCTG TTCCAGACGG ACAACCCGCA CACCGCGGAC
CTGCTGGTCA GGGGCGGCTA TCTATTCATT CTTTTTCTGC CGACAACGTT CTACCACTTC
GTGACGGAAG TGGCGGCGCA GCGCCGCGAG CAGCCGATAT TGCTGGCGTC GTACGGTCTG
TGTTTCGTCC TCGCGATACT GCTGCCCGGT AACGAAGTGG TGGCGGGCTA TCAGCATTTC
TTCTTCGGCT ACTATCCGGT CGCCGGGCCG CTGCATCCCT TGCACGTGGT GCAGACCGTG
CTGCTGGCCG GCCGCAGCGC GCAGCTTCTG CTCGCCGCGC GTCAGAAGGC AGAGGGCGAC
GCGCGGCGGC GCCTCGATCT GTGTCTGGCG AGCCTGTGTC TGTACTCGTT TGCCGCGATG
GACTACGCGG TCAACTACGG CTTCGGGTTC TATCCGCCGG GCGTCCTGTT CATCGGTCTG
AGCCTCGGGC TGCTGGCGAT CACCATCGTG CGCTATCACC TGATTCACCC GTATGCCGTG
GCGGCGACCA TTGCGCACGA AATCTCGACG CCGCTTGCCA CCATCGGCAT GCACGCCGAC
GAAATCGCCA GCGTGTGGGG GCATGTGTTC AAAGGATACC GAACAGCCGT CACGCACGGG
CTGTATGAGG ATCACGACGA GGTTGGACAG TCCGAACGCA TCGGCCAGCT GGCGACGGCG
ATCCGGCGCG AAGTCTCCGG CACCAGCGCA ATGGTCGAAA TGGCGCTCGC GTCTTTCACG
CTCGATCGTC TGGATCGCGG CGACTTCAGC CGGCATTCGG TGCATCAGTG CGTGATGTCC
ACGCTCGAAC GGTATCCGTT CAGCGGCGAC GAGCGTGAGC GTGTCACGGT GATGCCCATC
GACCTCGCCA TGTCTTTTTC GGGCTCGGAT ACGGTCGTGG TTTTCGTGCT GTTCAATCTG
CTGAAAAACG CGTTGCATGC CATTCGCGTG GGCGGCGACG GGGCGATTAC GATCAGTGCC
GTTCAGGATC AGGACTTCTG CGTGCTGCAA TTCCGCGACA CGGGGCCCGG CATCGCGCCC
GACGTCCTGC CCTATATCTT CGACGCTTTC TTCACGACCA AGCGGCACGG CAGCGGCGCG
GGCATGGGAC TCGCGTTCTG CCGTCGCGCG ACGGAGCTGC TGGGCGGGAG TATCGAGTGC
AGTTCGATAC GCGGCATCCA CACCACCTTC ACCGTGCGGT TGCCGGCGCC GGACACGCCC
GCCGATCGCG CACTGCGCAA GACGCCGGCG CAGCATTCGC CTCGCTGGAG TCAGGGCCAA
TGA
|
|---|
| Protein sequence | MYAIPTACVS AMFVVFGLYV LITQGATRLF TPFILMCVST FAWQGAWTLL FQTDNPHTAD
LLVRGGYLFI LFLPTTFYHF VTEVAAQRRE QPILLASYGL CFVLAILLPG NEVVAGYQHF
FFGYYPVAGP LHPLHVVQTV LLAGRSAQLL LAARQKAEGD ARRRLDLCLA SLCLYSFAAM
DYAVNYGFGF YPPGVLFIGL SLGLLAITIV RYHLIHPYAV AATIAHEIST PLATIGMHAD
EIASVWGHVF KGYRTAVTHG LYEDHDEVGQ SERIGQLATA IRREVSGTSA MVEMALASFT
LDRLDRGDFS RHSVHQCVMS TLERYPFSGD ERERVTVMPI DLAMSFSGSD TVVVFVLFNL
LKNALHAIRV GGDGAITISA VQDQDFCVLQ FRDTGPGIAP DVLPYIFDAF FTTKRHGSGA
GMGLAFCRRA TELLGGSIEC SSIRGIHTTF TVRLPAPDTP ADRALRKTPA QHSPRWSQGQ
|
|---|
| |