Gene Bphyt_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2304 
Symbol 
ID6283164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2597714 
End bp2599120 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content62% 
IMG OID642621861 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001895927 
Protein GI187924285 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.816033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTT TCAGCTTTCG CCGTTCGGCC CGTTCGCACA CGGTCGTCGG CGATATTGCC 
GCGCAAGCCG GCAAACTGGG CATCGAAATC TGCGACGTAT CGGGCCACGT CGAGGAAGTG
GCCGCGCGCG TGCAACATCA GGCGCAAGTA TGCCGCGCGT TGCGCGAATC GGCCGCGCAG
ACGCTCGCGG GCAATCATCG CATTGCCGCG GCCGCACGGA AAATGAGCCA CGTATCCGCC
GAAGCCGCGA CCGGCGTGCA GGACTCGCAG CAAACGCTCG AAGCGTCGCT CGCCGACATT
CATGGACTCG TTGAAGGCGT GACTGTCATC GAAAGCCAGA TCGGCGCGCT GCGCAGTGCG
CTGGCGCATG TGAGCCGTGT CTCCGAGGAG ATTTCGCTGA TCGCGCGTCA GACTCATCTG
CTGGCGCTGA ATGCCGCGAT CGAAGCTGCG CGCGCCGGCG ACTCCGGCAA AAGTTTCGCG
GTCGTCGCGG CCGAAGTGAA GAACCTCTCG GCGAAGACCG CGCAGGCCAC CGGGCAGATC
GAGACGACGC TCGCGCAACT CACGCAGCAG ACCGAGCAAC TGATCAGCGA GGGATCCGTG
AACACCGCGC GAGCGCACCG CGTGCGCGAA GGCACGCGCA AGATCGGCGA CGTCGTGCAT
GCAACCGGCG ATGCGATCGC GCATCTGAAT GACGAGGCGG GCCAGATCGC CGTGCTGACC
GGCGAGATCG AATCGCAGTG CGACGGACTC GAGGCGCAGG TGTTGGAAAT GGCGAGCGGC
GTCGAGGATT CGAGCGAGAA TTTCGTGCAG GCGAAGGACC GGTTGGGCAA TTTGCTCGGT
GTGTCCGAAA CTCTGATCGA GCTGACCGCC GCGACAGGTG TGGAAACGGC GGACACGCGT
TTTATCAAGG CCGTGCAGCG GGCGGCGGCC GCCGTGAGCA AGGCATTCGA AACGGCGGTG
GCGCGTGGTG AAGTGTCGCT TGATGACCTG TTCGACCGGC ATTATGTGCC GGTGGCCGGG
AGTAATCCGC CGCAGTTTTT GACGCGATTT ACCGCGTTGA CCGATCGTGT TTTTCCGGCT
ATTCAGGAGC CTCTGCTCGG TCTCGATCCG CGCGTCGCGT TTTGCGCGGC GGTCGATTTG
CGGGGTTATT TGCCGACGCA CAATCTGAAG TTTTCTTTGC CTCAGCGTGA TGGTGATGTC
GTCTGGAATA CGGCGAATTG CCGGAACCGG CGGATGTTCG ATGATCGGAC CGGGATTGCC
GCGGCTTCAC ATACGAAGCG GTTTTTATTG CAGACGTATC GGCGGGATAT GGGGGGTGGC
GAGTTCGTGT TGATGAAGGA TGCGTCTGCG CCGGTTTTTG TCGGTGGGCG GCATTGGGGT
GGGGTTCGGA TTGGGTATCG GGTTTGA
 
Protein sequence
MTRFSFRRSA RSHTVVGDIA AQAGKLGIEI CDVSGHVEEV AARVQHQAQV CRALRESAAQ 
TLAGNHRIAA AARKMSHVSA EAATGVQDSQ QTLEASLADI HGLVEGVTVI ESQIGALRSA
LAHVSRVSEE ISLIARQTHL LALNAAIEAA RAGDSGKSFA VVAAEVKNLS AKTAQATGQI
ETTLAQLTQQ TEQLISEGSV NTARAHRVRE GTRKIGDVVH ATGDAIAHLN DEAGQIAVLT
GEIESQCDGL EAQVLEMASG VEDSSENFVQ AKDRLGNLLG VSETLIELTA ATGVETADTR
FIKAVQRAAA AVSKAFETAV ARGEVSLDDL FDRHYVPVAG SNPPQFLTRF TALTDRVFPA
IQEPLLGLDP RVAFCAAVDL RGYLPTHNLK FSLPQRDGDV VWNTANCRNR RMFDDRTGIA
AASHTKRFLL QTYRRDMGGG EFVLMKDASA PVFVGGRHWG GVRIGYRV