| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2278 |
|---|
| Symbol | |
|---|
| ID | 6283405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2566255 |
|---|
| End bp | 2567238 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642621835 |
|---|
| Product | PfkB domain protein |
|---|
| Protein accession | YP_001895901 |
|---|
| Protein GI | 187924259 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.741137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CAACCACATC ACTCGATGTC ATCACCTACG GTGAAGCGAT GGCCATGTTT
GTGGCCGCCG AAACCGGCCC GCTCGCGGGT GTCGGTCAGT TCACGAAGCG CGTCGCCGGC
GCCGATCTGA ACGTGGCGAT CGGTTTGTCG CGCCTCGGCT TCAAGGTCGG CTGGATGAGT
CGCGTCGGCA ACGATTCTTT CGGCCAGTAC GTGCGCGACA CGTTGACGAA AGAGGGCATC
GACCAGGGCT GTGTCACGAC CGACGAGCGC TACCCGACCG GCTTCCAGCT CAAGTCGAAA
AACGACGACG GCAGCGACCC GGCGATCGAG TATTTCCGCA AGGGTTCGGC GGCGAGCCAT
CTCTCGCTGG CTGACTATGC GGCCGACTAC GTCCTGCAAG CGCGTCACCT GCATCTGACC
GGCGTGGCCC CCGCGATTTC GGCGAGCTCG CGCGAACTCG CGTTTCACCT GGCGCGCGAA
ATGCGTGCCG CTGGCAAGAC GATTTCGTTC GACCCGAACC TGCGTCCGAC GCTGTGGCCG
TCGCGCGCCG CGATGGTCGA AGGTCTGAAT GCGCTCGCCG CGCTGGCCGA CTGGGTGCTG
CCCGGTATCG GCGAAGGCGA GATTCTGACC GGCTACACGC AGCCGGATGA CATCGCGAAG
TTCTATCTGG AGCAGGGCGC GCGCGGCGTG ATCATCAAGT TGGGCGCGCA GGGCGCGTAC
TTTCGCACCG CCGACGATGC CGCCATGATC GCCGGTCAGC CGGTTGCGAA AGTCGTGGAC
ACGGTCGGCG CGGGCGATGG TTTCGCCGTC GGCGTGGTCA GCGCTTTGCT CGAAGGCAAG
TCGCTGCCGC AAGCGGTGGC GCGCGGCAAC CGCATCGGTG CGCTTGCGAT TCAGGTGATC
GGCGATTCGG AAGGGTTGCC GAGCCGCGCC GAACTCGACG CGTTGGAAGC CGCGCAAGCG
CCGTCCGTCG CGGCCGCGGC CTGA
|
|---|
| Protein sequence | MSKTTTSLDV ITYGEAMAMF VAAETGPLAG VGQFTKRVAG ADLNVAIGLS RLGFKVGWMS
RVGNDSFGQY VRDTLTKEGI DQGCVTTDER YPTGFQLKSK NDDGSDPAIE YFRKGSAASH
LSLADYAADY VLQARHLHLT GVAPAISASS RELAFHLARE MRAAGKTISF DPNLRPTLWP
SRAAMVEGLN ALAALADWVL PGIGEGEILT GYTQPDDIAK FYLEQGARGV IIKLGAQGAY
FRTADDAAMI AGQPVAKVVD TVGAGDGFAV GVVSALLEGK SLPQAVARGN RIGALAIQVI
GDSEGLPSRA ELDALEAAQA PSVAAAA
|
|---|
| |