Gene Bphyt_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1247 
Symbol 
ID6284188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1397107 
End bp1397475 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID642620806 
Producthypothetical protein 
Protein accessionYP_001894886 
Protein GI187923244 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.670192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT GGCTTGTTGC AGTCACCACG GCGGCGGGTC TCGCGGCGCT ATGCGGCGAG 
GCGTGGGCCG CGCCGTTGCA GTTCTCCGAG ATTCAGACCA AAAACCGTCA GACGCACAAA
TACACCTGTG CGACCGGCAA GATCCTGCAC GTCACTTACT GGAACACGGC GAATGGCCAG
AGCTTCGCGC TCGTGCCGGT GAAGGGCAAG CAACTGCTGT TCGTCAACAC GCTGTCGGCG
TCCGGCGCGA AATATCAGGC CGGCAGTTAC ACGTGGTGGA CCAAGGGCCC GCGCGCCGAC
CTGTACGACG CCATGGCCGG CGAAAACGCG CCGCCCATGC TCTCCGACTG TATCACCATC
AATCGCTGA
 
Protein sequence
MKKWLVAVTT AAGLAALCGE AWAAPLQFSE IQTKNRQTHK YTCATGKILH VTYWNTANGQ 
SFALVPVKGK QLLFVNTLSA SGAKYQAGSY TWWTKGPRAD LYDAMAGENA PPMLSDCITI
NR