| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1049 |
|---|
| Symbol | |
|---|
| ID | 6282491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1184157 |
|---|
| End bp | 1185239 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642620611 |
|---|
| Product | Alpha/beta hydrolase fold-3 domain protein |
|---|
| Protein accession | YP_001894692 |
|---|
| Protein GI | 187923050 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.338182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.991492 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGAC GCCTTCTCAC CCTGACCGCC ACGCTGGCCC TCGCCGCTCT CGGCGGCTGC
AGCGCGGCGG GCGTATTGAA CGCCGCCGTA TCGCACAAGC AGTTCCGCGC CGAAAACGGC
CTGGCTTACG GCAACGCGCC GCGCCAGAAA CTCGACGTCT ACGTACCCAC CGCCGACGCG
CCGGCAGCCG CTTCTTCGCA TGGCCGTCCG ATGGTGGTGT TCTTCTATGG CGGCAGTTGG
CAGAACGGCT CGCGCGGCAA CTATCTGTTC GTCGGCGCGG CGTTGGCCTC GCGCGGCTTC
GTTGCCGTGC TGCCGGACTA TCGGACGTGG CCCGACACCG CGTTCCCCGG TTTCGTCGAC
GACGCGGCCG CGGCCGTGCG CTGGGCACGC GACCACGCGG CCGAGTTCGG CGGCGACCCG
TCGCGAATCT TTTTGATGGG ACACTCGGCG GGCGCGCATA TCGTGATGCT GCTCGCCACC
GACGGCCGCT ATCTCGCCGC GCAGCAGATG AGCAAAAGCG ATATCAGCGG CGTGATCGGC
CTGGCCGGGC CGTATGATTT TCTGCCTTTG CACGACGCGA CGCTGGAGGA AATTTTCCCG
CGTGCCTTGC GCGCCGCGAG TCAGCCGATC AACTTCGTCG CCGGCGACGA GCCGCCGATG
TTCCTCGCGG CAGGCCAGCG CGATACGACC GTCGATCCGG GCAACACCGA CCGGCTCGCG
GCGAAACTGC GCGCATCGGG CGACGCGGAT GTCGAAGTGA AGCACTATCC GCGCGTCGGG
CACGCGCTGC TGGTGGGCGC GTTTGCCGGC CCGTTGCGCG GCTTTGCGCC GGTGCTCGAC
GATGCGAGCG CGTTTATCGA CAAGCAGGCT AGCAATGAAG TACGGCGTTC GCACAAGAGC
GCTGCAAACG GTGGCGCGCC ATTACTGCCC GCATCTTCGG ACGCGCAAGG CAACGTCTAT
CAGATGCGCA GGCAACGGGC GAAAGCAGCG GTTGCGTCGT GCGATGGCTC GGCATCCGTA
TCGGCGCCCG CCGCTGATAC GGATTGCCAG AAACAACAAG GCAATCTGGG CCTCAGCGAA
TAA
|
|---|
| Protein sequence | MPRRLLTLTA TLALAALGGC SAAGVLNAAV SHKQFRAENG LAYGNAPRQK LDVYVPTADA
PAAASSHGRP MVVFFYGGSW QNGSRGNYLF VGAALASRGF VAVLPDYRTW PDTAFPGFVD
DAAAAVRWAR DHAAEFGGDP SRIFLMGHSA GAHIVMLLAT DGRYLAAQQM SKSDISGVIG
LAGPYDFLPL HDATLEEIFP RALRAASQPI NFVAGDEPPM FLAAGQRDTT VDPGNTDRLA
AKLRASGDAD VEVKHYPRVG HALLVGAFAG PLRGFAPVLD DASAFIDKQA SNEVRRSHKS
AANGGAPLLP ASSDAQGNVY QMRRQRAKAA VASCDGSASV SAPAADTDCQ KQQGNLGLSE
|
|---|
| |