| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0769 |
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| Symbol | |
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| ID | 6283389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 848210 |
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| End bp | 849022 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620333 |
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| Product | hypothetical protein |
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| Protein accession | YP_001894416 |
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| Protein GI | 187922774 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.130471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC GTTCGAATTC TGCTCGCGGC CACACCCTGG TCGAATTCGT GATTGCGATG
GCGCTGGGAC TGCTAGTGAC TGCGGGTGCC GTCTCGCTCT ACACGACGCA GCGGATCGCA
TTCGAACGCG CGGGCGATGC GATGCGGATT CGCGAAGCCG GTCTGACTGC GCTGACGCTG
ATTGGCCAGC AATTGCAAAT GGCGGGCTTC GTACCCGCGG ACATCGTGCG GTACAACAGT
CCGCCGCCGC TGTTCGGATG CTCGGGAGGC CGCCCGACCG GCGCGGACGA TAGCCCTGCC
TGCGAGACCT TGCCCAGTCA CTCGGACGGC GTCGCGGTCC GTTATGTTGG CGACAACGTC
TCCACGTGGC CGTCGGCCAG CGGGCAAACA ACCGATTGCC TCGGACAGGC CGTGTCAGGC
AGCAGCGCCG CGCTCGGCGA CCAGGGCGTT GCGGTCGTCA ACCGGTACTT CGCGAGGGTC
AGCGGTTCGA CCGGTGAGCC GGAGCTGTAC TGCGAAGGCA ACGGCAGGAC GGGATCCGCG
CAACCGCTGG TCGAAGGCAT CGAGCGCCTG CGGATCAAGT ACTGGTTAGC CGGTGGGCTG
GCCGCGATCG ACGCCTCTGC CGTGACGGCC GATCAATGGG CGAAGATCGT CGCCGTCGAT
CTTTGCGTGC TTGTACGCGG CGCGCCATTG GGGCAACAGC GTTCGCGCTA TGTCGATTGC
GATGGCGTAA ACGCTCTCGG TGCGGATTCG CGAACGCGTC AGGTGTTCTC GCGGCGTGTG
GCGATACGCA ATCATGTGGA GGGTTCGCTA TGA
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| Protein sequence | MTRRSNSARG HTLVEFVIAM ALGLLVTAGA VSLYTTQRIA FERAGDAMRI REAGLTALTL
IGQQLQMAGF VPADIVRYNS PPPLFGCSGG RPTGADDSPA CETLPSHSDG VAVRYVGDNV
STWPSASGQT TDCLGQAVSG SSAALGDQGV AVVNRYFARV SGSTGEPELY CEGNGRTGSA
QPLVEGIERL RIKYWLAGGL AAIDASAVTA DQWAKIVAVD LCVLVRGAPL GQQRSRYVDC
DGVNALGADS RTRQVFSRRV AIRNHVEGSL
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