| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0483 |
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| Symbol | |
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| ID | 6283711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 536508 |
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| End bp | 537743 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620047 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001894132 |
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| Protein GI | 187922490 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0914571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGAA TCGAATTCCT TGAACCCGAA ACCCAGCGCG CTCGCGCGTC CAACCACTCG
CGCCCGACGC CATCGCGCGG TCGCCTCACG CGTCGTGCCG TTGCGCTATG CGCGGCGTTG
GCGGGTGTAT TGCCCGGTAT CGCGTTGGCG CAGGTGAAAA TCGGCCTGGT ATTGTCGCTC
ACCGGACCGG CCGCGTCGCT CGGCATTCCG GCGCGCGATA CGGTCGCGCT GCTGCCCAAA
CAGATCGGCG GTCAGAGCGT CGAATACATC GTGCTCGACG ACGCATCCGA TACTACGCAG
GCCGTGCAGG ACACCAAGAA ACTGATCTCC GAGAATCACG TCGACGCGAT CATCGGGTCG
TCGATCACGC CGAATTCGCT GGCCATGATC GATGTAGTCG CCGAAGGTCA AACGCCGATG
ATCTCGCTGG CCTCGTCGGC GAAAATCATC GAGCCCGTGG ATGCGAAACG CCACTGGGTC
TTCAAGACGC CACAAACCGA CGCGATGATG GCGTCGGCGA TTGCCGAACA CGCCAGTCTG
CACGGCGTCA AAACCATCGC ATTTATTGGC CAGGCCGACG CGCTCGGCGA GACCTTCTAC
ACCGAGGTCG CGAAGTTCGC GCAGCTGCAT CACATCGAGA TGGTGGCGAG CGAGCGCTTT
AATCGCACCG ATCCGAGCGT GACCGGCCAG GTCCTTAAGA TTCTCGCGAC GCATCCGGAC
GCGGTGGTGG TCGGCGCGGC CGGCACGCCC GCCGCCTTGC CGCCGAAAAC ACTGAGGGAA
CGTGGCTACA AAGGCCTGAT CTATCACAAT CACGGCGTTG GGAATAACGA CTTCCTGCGC
GTCTGCGGCG CCGATTGCAA TGGCACCTTC CTGCCCGCGA GTCCGGTGCT GGTCGCCGCG
CAATTGCCGG CGGATCATCC GGCCAAGCGG CTTGCGCTCG ATTACATCGC GCGCTTCGAA
GCGGTGCGCG GCGCGGGCAG CGTCTCGGCA TTCGGCTCGT ACACGTGGGA CGCGGGCATG
CTGCTCGGTC ATGCCGTACC GATCGCGTTG AAAAGCGGCG CGCCGGGCAC GCCGGAATTT
CGCCGCGCGC TGCGCGATGC GCTCGAAGCA ACACGCGGTC TCGCGGACAC CAACGGCGTC
GTCAACATGA GCGCCACGGA TCACCTCGGG CTCGATCAGC GGGCGCGGGT GATGGTCGAA
ATCAAGAACG CGAAGTGGGT TTATCAGCCG CGTTGA
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| Protein sequence | MPRIEFLEPE TQRARASNHS RPTPSRGRLT RRAVALCAAL AGVLPGIALA QVKIGLVLSL
TGPAASLGIP ARDTVALLPK QIGGQSVEYI VLDDASDTTQ AVQDTKKLIS ENHVDAIIGS
SITPNSLAMI DVVAEGQTPM ISLASSAKII EPVDAKRHWV FKTPQTDAMM ASAIAEHASL
HGVKTIAFIG QADALGETFY TEVAKFAQLH HIEMVASERF NRTDPSVTGQ VLKILATHPD
AVVVGAAGTP AALPPKTLRE RGYKGLIYHN HGVGNNDFLR VCGADCNGTF LPASPVLVAA
QLPADHPAKR LALDYIARFE AVRGAGSVSA FGSYTWDAGM LLGHAVPIAL KSGAPGTPEF
RRALRDALEA TRGLADTNGV VNMSATDHLG LDQRARVMVE IKNAKWVYQP R
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