| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6274 |
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| Symbol | |
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| ID | 6247819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 838389 |
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| End bp | 839486 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597954 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001862356 |
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| Protein GI | 186471038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.283816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.34418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACT TCAAGCGGAG CCGAAGGCAG GCAATCAAGA CCATTGGCAC AGCGCTCGCC
GCCACGGCGC TGCCAATGCC CTTCATCAGC ACTGCTAAAG CCCAGCAGAG CAGCTTCGCG
GGCAAGACGC TGCGGCTGCT TACCTGGTCC GACGACACGG GCGCGGCGGC ACTGCGCAAC
ATCGCCAACA CGTTCAGCAA GAAGACGGGC GCACAGGTCA TCGCCGACCG CGCGGACGGC
ACCTCGGGCA TGGTCGCAAA AGTGAAGGCT GCCGGTACCC GTCCGACCTA CGACGTGATC
ACGCTCGCCG GCGTCGGCGC CGCAGGTCTC GGTGAAGCGG GGCTGCTGGC CAAGCCGGAT
CTCGACAAGC TGCCGAACCT GAAGGACGTT TTGCCGCAAT ACCGCACGGG CGCAAACGGT
TTTGGCATTG GCTATCTGCT GTGGTCCGAC GGCCTCATTT ACAACACATC GACTGTGAAG
ACCGCGCCGA CCTCATACGA AGCGCTGTGG GACCCGAAAT ACGCAGGGCG TCTGTTCCTG
CCGCCGCCAG AGTGGGCGGA AGCAGTCGAT CTCGCGATCA TCGCCGCGAA GCTCGTGGGT
GGCTCTCAGC AGAACATCGA GCCCGGGTTC AAGAAGCTGG CGGAGCTGAA AGAGCGGGTG
ATGACGCTCG GCGAAAATCC GAATCAGGTG GCGGACCTGT TCCGCACGGG TTCGCTCGAT
ATCGGCGGCA TCTATTCACC GGCATTCTTC CCTGATCAGA TCAGGAAGCC GGAGTACAAG
ATGGGCGTCA CGTACGGAAT GAAGGAAGGC TTCGCGACGC AGCTCATGTT CTCGGTGATC
CCCAAGGCTC ATCCTGGCGA CATCGACCTG ATTCATGCCT TCATCAACCA CACGCTCGAT
GCCGGCGTGC AAGGCCGCAT GGCTGCCGAT GTATTGAACG GCCCGGTGAA CTCGAAAGCG
CTGATACCCG CCGACAGCCG CGCATTCGTG CCTTCACCTC AGCAGATCGC CGAGAAAGCC
GTCTTGCACG ACGACAAGGC GCTCGCGCTC GTGCAGGCGG CGTGGATCAA GCGTTATACC
GAGATCTTCT CGGCCTGA
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| Protein sequence | MQDFKRSRRQ AIKTIGTALA ATALPMPFIS TAKAQQSSFA GKTLRLLTWS DDTGAAALRN
IANTFSKKTG AQVIADRADG TSGMVAKVKA AGTRPTYDVI TLAGVGAAGL GEAGLLAKPD
LDKLPNLKDV LPQYRTGANG FGIGYLLWSD GLIYNTSTVK TAPTSYEALW DPKYAGRLFL
PPPEWAEAVD LAIIAAKLVG GSQQNIEPGF KKLAELKERV MTLGENPNQV ADLFRTGSLD
IGGIYSPAFF PDQIRKPEYK MGVTYGMKEG FATQLMFSVI PKAHPGDIDL IHAFINHTLD
AGVQGRMAAD VLNGPVNSKA LIPADSRAFV PSPQQIAEKA VLHDDKALAL VQAAWIKRYT
EIFSA
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