| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6192 |
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| Symbol | |
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| ID | 6247748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 748627 |
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| End bp | 749322 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642597883 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001862285 |
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| Protein GI | 186470967 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.446565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0472092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGATA CGACGCTGAT TCGCATCCTG GTGGTAGACG ACCATACGCT CTTCCGGCGC
GGCATCATCG CGCTGCTGTC CACCGACGAA CGCTTCGTTG TGGTCGGCGA GGCCGGCGAC
GCGGGCGAAG CCTGTAGGCG CGCGAACGAG ACGCAGCCCG ACGTGATCCT GCTCGATAAC
CACCTGCCGG GCGTGCGCGG CATCGATGTG CTGCCGGGAC TCGCTGAACT GGCGCCGCAG
GCGCGCGTAC TGATGCTGAC GGTCAGTGAA GACGAACAGG ATCTCGCCGC AGCGCTCCGG
GGCGGCGCTC GCGGCTATCT GCTGAAGACT GTCGACAGCA GCGCGATGGC CGACGCTATC
GTGCGGATTA TGGCAGGCGA ATCGACAATC AGCCCCGAAA TGACGGGGAA ACTGGTGAGC
GCGTTTCAGG CGCTGCAGCC CGGCGAGGTG CCGCCTGCTG CGTCACCCTC GGTGCTCGCG
CCGGCGGTGC CCGATCCGAT CGAGTCGCTG TCCGCGCGCC AGGAGGAAAT CCTTGCGCAT
ATTGCACGGG GCGAAACGAA CAAGGAGATC GCGCGGGCGC TAAACATTGC GGAAACGACT
GTGAAGATCC ACGTCCAGCA GGTGTTGAAG AAGCTGAAGC TGGCATCGCG AGTTCAGGCG
GCCACCTACG CCGTAATGCG GATGCGGCAC GCCTGA
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| Protein sequence | MNDTTLIRIL VVDDHTLFRR GIIALLSTDE RFVVVGEAGD AGEACRRANE TQPDVILLDN
HLPGVRGIDV LPGLAELAPQ ARVLMLTVSE DEQDLAAALR GGARGYLLKT VDSSAMADAI
VRIMAGESTI SPEMTGKLVS AFQALQPGEV PPAASPSVLA PAVPDPIESL SARQEEILAH
IARGETNKEI ARALNIAETT VKIHVQQVLK KLKLASRVQA ATYAVMRMRH A
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