Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5309 |
Symbol | |
ID | 6246794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2444733 |
End bp | 2447003 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642597030 |
Product | DEAD_2 domain-containing protein |
Protein accession | YP_001861433 |
Protein GI | 186474091 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.173286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0033003 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTATG TCGTCGCGGT GCGCACGCTG TGCGAGTTCA CCGCGCGGCG CGGCGATCTC GATCTGCGCT TCACGCCCGC GCCTTCGGCG CTGGAAGGCA TCGCCGGGCA TCAAGCCGTG GCCGCGCGGC GCGCGTCGGG CTACGAGGCG GAAATCACGT TGACGGGCGC GCATCGCGGG CTGACCGTGC GCGGCCGCGC CGACGGCTAC GACGCGGCGC TCAACCGGCT CGAAGAGATC AAGACGCATC GCGGCGACCT TGAACGGATG CCCGGGAACC ATCGCGCACT GCATTGGGCG CAGGCGCGCG TGTACGGTCA TCTGCTGTGC GAGACGCGCG GCCTCGACGC ATTGACGGTC GCGCTCGTGT ACTTCGATAT CGGCGACCAG AAGGAAACGG TGCTGACGGA ACAGCATACG GCGGCCTCGT TGCGCGCGTT CTTCGAGGAT CAATGCGAGC GCTTCGTTGC CTGGGCGGCG CACGAAGAAG CGCATCGCAA CGCGCGCAAT GCCGCGCTCA ACGCGTTGCG CTTTCCGTAC GGCGAATTTC GCAGCGGACA GCGCGAACTC TCGGTGGCCG CGTTCCGTGC CGCGCGCGAC GGCCGCTGTC TGATGGCGCA GGCGCCGACG GGTATCGGCA AGACGCTCGG CACGATTTTT CCGCTGCTCA AGGCGTGCGG CGCGGATCAT CTGGACCGCG TGTTCTTTCT GACGGCCAAG ACGCCGGGCC GCGCGCTCGC GCTCGACGCG ATCGAATCGC TGCATCGAAG CGAAGCCGCG CTGCCGGTGC GCACGCTCGA ACTGGTCGCG CGCGACAAGG CCTGCGAGCA TCCCGACGCA TCCTGCGACG GCGAATCGTG TCCGCTCGCG CGGGGCTTCT ACGACCGCTT GCCCGCCGCG CGCGACAGGG CCTTGCAGGC GCGCACGCTC GACCGGGCGG CCGTGCGCGA AGCGGCGCTC GCGCACGGCG TCTGTCCGTA CTATCTCGCG CAGGAGATGG CGCGCTGGTG CGACGTCGTG ATCGGCGATT ACAACTACTA CTTCGACAGC AGCGCGATGC TGTATGCGCT CACGCAGCTG AATGGCTGGC GCGTGGCCGT GCTCGCCGAC GAAGCACACA ATCTTCCCGA TCGCGCGCGC CGCATGTATA GCGCGACGCT CGATCAAGCC GCGTTTCGCG GCGCGCGTCA TAGCGCGCCC GCTACATTGA AGAAGCCGTT CGACCGTTTG AACCGCGAAT GGAATGCATT GAACCGCGAG CGCAACGTGG CATATGAAGT GCTGCCGGAT GTGCCTGCGA AGCTGCAGTC GGCGGTGCAG AATCTGATTG CAGCGATTGG CGACCACCTT GCGCAAGCGC CGCAAGCCGT AGACGAAAGC GCACTGCGTT TCTATTTCGA TGCGCTGCAT TTCATGTCGC TCGTCGAGCA GTTCGGCGGT CACTCGATCG TCGACGTGTC GCTCGATTCG CATTCGGGTT TGGCGCGCGC GAAGCCCGCG ACATCGATCT GCGTGCGCAA CGTGATACCC GCGCCGTTCC TCAAGCCGCG CTACGCGGCC GCGCGCGCGA CGATTATCTT TTCGGGCACG CTCAGTCCGC AGCACTTCTA TCGCGACATG CTCGGTCTGC CCGACGATAC GGGCTGGCTC GACGTTGAAG GGCCGTTCAG GGCGGAGCAG CTGCAAGTGC GTGTCGCACA TCGCGTGTCG ACGCGCTGGC GCGACCGCGA GCGTTCGCTC GAACCGATCG TCGATCTGAT CGCACAGCAA TACGCCGAGC GTCCCGGCAA TTATCTCGGC TTTCTGAGCA GCTTCGACTA TTTGCAGCGC GTGGCCGATT CGATGCGCGA GCGGCATCCA CACGTGCCCA TCTGGACCCA GGCGCCGCGC ATGGACGAAA CGGCGCGCGA CGCATTCCTT GCGCGCTTCG CAGCGGACGG TGCGGGTGTC GGCTTCGCCG TGCTGGGCGG CGCGTTTTCC GAAGGCATCG ATCTCGTCGG CGAACGGCTG ATCGGCGCGT TCATCGCGAC ACTCGGCTTG CCGCAGATGA ACGAGGTCAA CGAACAGATG CGCCGCACGT TCGATGAGCA GTTCGGCAAC GGGTACGACT ACGCGTATCT GTATCCGGGC ATGCAGAAAG TCGTGCAGGC CGCGGGGCGC GTGATCCGCA CCGAACACGA TGCGGGCGTC GTGCATCTGA TCGACGACCG CTATACGCGC GCCGATGTCA GGCGGCTGTT GCCGCGCTGG TGGAAGGTGG CTCGCGCGTG A
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Protein sequence | MTYVVAVRTL CEFTARRGDL DLRFTPAPSA LEGIAGHQAV AARRASGYEA EITLTGAHRG LTVRGRADGY DAALNRLEEI KTHRGDLERM PGNHRALHWA QARVYGHLLC ETRGLDALTV ALVYFDIGDQ KETVLTEQHT AASLRAFFED QCERFVAWAA HEEAHRNARN AALNALRFPY GEFRSGQREL SVAAFRAARD GRCLMAQAPT GIGKTLGTIF PLLKACGADH LDRVFFLTAK TPGRALALDA IESLHRSEAA LPVRTLELVA RDKACEHPDA SCDGESCPLA RGFYDRLPAA RDRALQARTL DRAAVREAAL AHGVCPYYLA QEMARWCDVV IGDYNYYFDS SAMLYALTQL NGWRVAVLAD EAHNLPDRAR RMYSATLDQA AFRGARHSAP ATLKKPFDRL NREWNALNRE RNVAYEVLPD VPAKLQSAVQ NLIAAIGDHL AQAPQAVDES ALRFYFDALH FMSLVEQFGG HSIVDVSLDS HSGLARAKPA TSICVRNVIP APFLKPRYAA ARATIIFSGT LSPQHFYRDM LGLPDDTGWL DVEGPFRAEQ LQVRVAHRVS TRWRDRERSL EPIVDLIAQQ YAERPGNYLG FLSSFDYLQR VADSMRERHP HVPIWTQAPR MDETARDAFL ARFAADGAGV GFAVLGGAFS EGIDLVGERL IGAFIATLGL PQMNEVNEQM RRTFDEQFGN GYDYAYLYPG MQKVVQAAGR VIRTEHDAGV VHLIDDRYTR ADVRRLLPRW WKVARA
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