| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4878 |
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| Symbol | |
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| ID | 6246390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1957434 |
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| End bp | 1958582 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642596622 |
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| Product | porin |
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| Protein accession | YP_001861029 |
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| Protein GI | 186473687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.311549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA GGTCGAGTCG AACGGGGAAT GGTTTTTCGT GGCGTCAGAC GATTGGCTGG
GGACTGCTGT CGCTCGCGAT GTGTGCACCG GTGGCGTCGC AGGCACAGAG TTCGGTCACG
CTGTACGGCA TCATCGATAC GGGCGTCGAA TATGTGACCA ACAACGGTCC AACAAAGTCG
AGTGCGGTCC GCGTCCCGTC GTTCACCGCG TCGATTCCTT CGAGGTGGGG GTTTCGCGGC
AAGGAGGATC TTGGCGGCGG GCTCAGCGCG GTGTTCGTGC TGGAATCGGG ATTCGCTCCG
TCGACGGGGG CGCTGAACCA GGGCGGCCGC CTGTTTGGCA GGCAGGCCTA CGTCGGCCTG
TCGGGGCGAT GGGGAACGTT CACGCTGGGC CGGCAATACT CGCAGATCTA CTGGGCGTTG
CCGGGCGACA CGATGGGCCC GAACATCTAC GCAGCCGGTG ACCTCGACCC TTACCTGTCC
CAGGCGCGGG TCGATAACGC TGTCGCCTAC ACGTTCACGA CGTCGGGACT GACGGTGGCC
GCTACCTATT CATTCGGGCG CGACGCCGTC GATCCCGCAG CGGCGGGCGG ATGCGCCGGC
CAGTCGCCGA CAGACTGGCG GGCCTGCAAG TCGATGTCAG CGATGGTGAA ATACGAAGCG
GCAACATGGG GCGTGGCGGC GGCATTCGAC CGCAACTACG GCGGAGGCGG CACCGGCTCG
CCACTGCCGA CCAGTTCGCT GACGGATACG CGCGCTGTGA TCGACGGCTA CGTGAAATTC
GGCACGGCGA CCATCGGCGC GGGATATCTG CATCGGATCA ATCACGGAGC GCAGACGGCG
ACGCTTTTCG ATGCCGTCAG CAACTACTGG TGGCTGGGCG GAACGTATCT CCCCGCTCCG
CAAATCGCCC TCGACGCCCA GTTCGGCCAC ATATCCGTGA ATAGCAGCTC CGCGGGCGCT
TCCGTGATTG CGGCGCGCGC GGCGTATCTC CTGTCGAAGC GCAGTTCGGT CTATATCACC
GTCGGACACA TGTTCAACGA GCGCAACGCG ACATTCACGA TCGACGGCGG CGTGCTGCCG
CCTGCGTCTA CGCCGTTGCC CGGAGTCGAT CAGACGGGCG TGATGGTGGG CGCGCGTCAC
CAGTTCTGA
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| Protein sequence | MSSRSSRTGN GFSWRQTIGW GLLSLAMCAP VASQAQSSVT LYGIIDTGVE YVTNNGPTKS
SAVRVPSFTA SIPSRWGFRG KEDLGGGLSA VFVLESGFAP STGALNQGGR LFGRQAYVGL
SGRWGTFTLG RQYSQIYWAL PGDTMGPNIY AAGDLDPYLS QARVDNAVAY TFTTSGLTVA
ATYSFGRDAV DPAAAGGCAG QSPTDWRACK SMSAMVKYEA ATWGVAAAFD RNYGGGGTGS
PLPTSSLTDT RAVIDGYVKF GTATIGAGYL HRINHGAQTA TLFDAVSNYW WLGGTYLPAP
QIALDAQFGH ISVNSSSAGA SVIAARAAYL LSKRSSVYIT VGHMFNERNA TFTIDGGVLP
PASTPLPGVD QTGVMVGARH QF
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