Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4002 |
Symbol | |
ID | 6245532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 975971 |
End bp | 976849 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642595764 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001860171 |
Protein GI | 186472829 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCG CGTTCGCCCA TACAGTCGAA GCAAGCTTCG CGACGCTCAC GCCCACGGCC AAGCGCATCG CCAGCTACAT GCTGGCGAAT CTGGAGCGCC TCGGCCTGGA AACGGCGGAC CAGATTGCGC AGCAGACGGG CACGAGCGGC ATTTCGGTGG GACGCTTTCT GCGCAGCGTC GGTTACCGCA ATCTCGACGA CCTGAAGCGT GAGCTTCGCG GGGCGCAATC GCGCCCGTGG TTCATCACGG ACCGGCTGGA CGCATACCGC AGCGAACGCG CTAATGGCAA TGCAAACGGC CTCGACGCGA ACGAAGCCAA CCCCGCCAGT TCGCTCGACC TCGAAGTCGA CGCAATCCGC TATGTCTATC AACTCGCGCA AGGTGAAGCG TTTGCACGCA TTGCCCAGCG CATTGCCGAA GCCGATGCCG TTTTCATTCT CGGCATTCAA TCGACGCGCG GCATCTCCAA CGCGTTCTAT AGCTACCTCG AATATCTGCG CCCACGCGTC TTCTATTCCG ACGGCATGTC TGGCTCGTAT GTGGACTCGC TCAATTCGGA GTTCGGGTCG CCGTATCTGA TCGTCACCGA CACACGCGCC TATTCGCGCA TCGCGCGCCG CTATTGCGAG GCCGCCGCGC GGCGCGACTT GCCCTTTGCG CTCGTCACCG ATCTCTATTG CCCGTGGGCG CGCGAGTTTT CTTGCGATCT GATTCAGGTG AAGACGGATG TCGGACAGTT CTGGGACTCG CTCGCACCGC TCACCTGTCT GTTCAATCTG CTGCTGACCT CGATCGTCGA AAGGCTCGGC CCCGCCATCG ACGAACGGGT CGCGCGCAAC CGCGAGTTGC AGCGCGAACT CGATCAATTC GACCTTTAA
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Protein sequence | MSTAFAHTVE ASFATLTPTA KRIASYMLAN LERLGLETAD QIAQQTGTSG ISVGRFLRSV GYRNLDDLKR ELRGAQSRPW FITDRLDAYR SERANGNANG LDANEANPAS SLDLEVDAIR YVYQLAQGEA FARIAQRIAE ADAVFILGIQ STRGISNAFY SYLEYLRPRV FYSDGMSGSY VDSLNSEFGS PYLIVTDTRA YSRIARRYCE AAARRDLPFA LVTDLYCPWA REFSCDLIQV KTDVGQFWDS LAPLTCLFNL LLTSIVERLG PAIDERVARN RELQRELDQF DL
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