Gene Bphy_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1421 
Symbol 
ID6242912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1601443 
End bp1602552 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content70% 
IMG OID642593204 
ProductXRE family transcriptional regulator 
Protein accessionYP_001857649 
Protein GI186476179 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0333143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC CGCAGCACCC GCAACCGCAC GACGTGGATA CGCATTCGGA TCGACCGCTG 
CCGGCGGCAC CGGCAGTCGT GCCGGGCGGG TTCGACTCGC TGGCTGCCGT CGGCGCCCGG
CTAGCACAGT TGCGCGAATC GAAGGGCTGG TCGGTCGAAG ACGTGTCGGC GCGCCTGAAA
GTCTCGCCGG GCAAGCTGCG CGGGCTCGAA GCAGGCGATC TCACCCTGTT GCCGGACACG
ACGTTCGCGC TGGGCGTGGT GCGCAGCTAC GCGAAGATGG TCGGGGCCGA TCCGGCACCG
ATGACGCAGG CGCTGCGCCG CGAGAAAGGG GTGCCGGAGC CGGCGCTGAC CATGCCGGCG
TCGGCCGGTA CGGATTTGCC GCGAGGGAAA GTGTCGCTGT CGCTTGGCGG CGGCGGTGCG
CCGCGCCGTC GTTCGTGGCT TTGGGGCGTA GCCCTGGCCG TGGTCGTGCT GATCGCGCTC
GCCATGTGGC ATACGAACAA TGGAGATTCG AACGCGTGGC TCGCACGTCT GAAGGGCATG
GCGGGCGGCT CGGCGCGCAC GGAAGGTGCG TCGTCGGTTG CGGGGCAACC GGCGAGCGGC
GCGTCAGTGA CGGGCGCAGT GACGTCGGCA TCGGCGACTC AGGCGGACGC ACCCGCGGAT
ACGCAGGCGG CGGACGCAGG AGGCGCGTCG TCGGCAATGC CCATGCCTAC GCCGCTGCCG
ATGGCAGGCG TCGCGCCGGC ATCGAATGCG GCATCGGTGT CTGCGCCGGC TGCTGCTGCC
CCGAAGGCCG CAAGTGCGGC ACCCGCTGTC GCGATGGCTG CATCGGCCGC GCCGGCCAGC
GAGCCGACGG CCGCACCTCA GGGCGCGTCG ACGGTCTCGC TGACGGTCAG GCAGGACAGC
TGGTTTAGCG TGCGTCAGAA GGACGGCAAG GAAGTGTTCT CCGGGCTCGT GCACGCAGGC
GAAACGAAGG AAGTCAGCGG ACAGCCGCCG CTCAAGGTGA CGGTCGGCAA CAAGGCGGGT
CTGGACTCGA TCACGCTGGA CGGCCAGCCG GTCGACCCGG CCAAATACGC GTCGGCCAAG
GGCAATGTGG CACGCTTCGC GTTGCCCTGA
 
Protein sequence
MSEPQHPQPH DVDTHSDRPL PAAPAVVPGG FDSLAAVGAR LAQLRESKGW SVEDVSARLK 
VSPGKLRGLE AGDLTLLPDT TFALGVVRSY AKMVGADPAP MTQALRREKG VPEPALTMPA
SAGTDLPRGK VSLSLGGGGA PRRRSWLWGV ALAVVVLIAL AMWHTNNGDS NAWLARLKGM
AGGSARTEGA SSVAGQPASG ASVTGAVTSA SATQADAPAD TQAADAGGAS SAMPMPTPLP
MAGVAPASNA ASVSAPAAAA PKAASAAPAV AMAASAAPAS EPTAAPQGAS TVSLTVRQDS
WFSVRQKDGK EVFSGLVHAG ETKEVSGQPP LKVTVGNKAG LDSITLDGQP VDPAKYASAK
GNVARFALP