Gene Bphy_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1298 
Symbol 
ID6242789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1456554 
End bp1457567 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID642593075 
Productallantoicase 
Protein accessionYP_001857526 
Protein GI186476056 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4266] Allantoicase 
TIGRFAM ID[TIGR02961] allantoicase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.221654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCC CGATTCTCGA TCCCAACGCA CCCGAGTTCA CGCGCCGTTT CGTGAATCTC 
GCCGACCCGC GTCTCGGCGC ACAGGCGCTC GAATCGAGCG ACGACTTCTT TGCGCCGAAA
GACCGCATGC TGAATCCGGA GCCGGCCGTC TTCGTTCCCG GCAAGTACGA TGAGCACGGC
AAATGGATGG ACGGCTGGGA AACGCGCCGC AAGCGCACGA CGGGCTACGA CTGGTGCATC
GTGAAGCTCG CGCGTCCAGG TGTGATCAAG GGCTTCGACA TCGACACGAG TCACTTCACG
GGTAACTTCC CGCCGGCGGC ATCGGTGGAA GCGACGCGTG TGGTCGACGG CGCGCCAAAC
CAGTCGACGC AATGGACTGA GATCGTCCCG TCGACGACAT TGCAGGGCAA CAGCCATCAC
TACATCGATG TGAGCGACGC AAACGCGTAC ACGCACCTTC GTGTGAACAT CTATCCGGAC
GGCGGCATCG CGCGTTTGCG TGTATACGGT CAGCCGCAGG TCGACTGGGC GGGCGCGAGC
CGTACCGACC TGTTCGATCT GGCCGCGATG GAAAACGGCG CCTATCTGGT CGCTGCGAAC
AACCAGCACT TCGGCGCCGC ATCGACGCTG CTGATGCCGG GCCGCGGCGT CAACATGGGC
GATGGCTGGG AAACGCGCCG CCGCCGCGAG CCAGGCAACG ACTGGGCGAT CGTCGCGCTC
GCGCAACCGG GCGTGATCAA GAAGATCGAA GTTGATACCG CGCACTTCAA GGGCAACTAT
CCGGACCGCT GCTCGATTCA GGCTGCGTTC GTCACGGGCG GCACCGACAG TTCGCTGATC
ACGCAGGCGA TGTTCTGGCC GGTGCTACTC GGCGAACAGA AGCTGCAAAT GGACAAGCAG
CACTTCTATG AAAGCGAGAT TGCCGCACTC GGTCCTGTCA CCCATATCCG CTTCAACATC
ATTCCCGACG GCGGTGTCTC GCGTCTGCGT CTGTGGGGCA CGCTCGCATC ATGA
 
Protein sequence
MALPILDPNA PEFTRRFVNL ADPRLGAQAL ESSDDFFAPK DRMLNPEPAV FVPGKYDEHG 
KWMDGWETRR KRTTGYDWCI VKLARPGVIK GFDIDTSHFT GNFPPAASVE ATRVVDGAPN
QSTQWTEIVP STTLQGNSHH YIDVSDANAY THLRVNIYPD GGIARLRVYG QPQVDWAGAS
RTDLFDLAAM ENGAYLVAAN NQHFGAASTL LMPGRGVNMG DGWETRRRRE PGNDWAIVAL
AQPGVIKKIE VDTAHFKGNY PDRCSIQAAF VTGGTDSSLI TQAMFWPVLL GEQKLQMDKQ
HFYESEIAAL GPVTHIRFNI IPDGGVSRLR LWGTLAS