| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0941 |
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| Symbol | |
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| ID | 6242439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1045320 |
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| End bp | 1047677 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642592717 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001857176 |
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| Protein GI | 186475706 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.237946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.754349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCAT CCACGAAAGC GATGAACTGC GATGCTCCCC TCGCGCGGCG CGGGTTCGTT
GCGTTCGTGC GCATCGTGCG CATCGTGCTT TGTATTTTAT GGGTCGGCGA ACCGCTCGCG
GCGCACGCAC TGCCGACCTT CGACGACGTC CGCACGCAAT GGCGCAGCTC CGACTGGCTG
CTGCTGTCTC GCGACGGGGT GCCGCTGCAG CGTACGCGTA TCGACCGGAC CGAGCGGCGC
GGCGACTGGG TCGCGCTCGC GGATGTGTCG CCCGCGCTGC GCGAAGCGAT CGTCGTGTCG
GAGGACAAGC GCTTCTACGA GCATAGCGGC GTCGACTGGC GCGGCGCCGC GGCGGCTGCA
TGGGCGAACC TGTGGAACAC GCGCACGCGC GGCGCGTCTA CCGTCACGAT GCAGCTGACG
GGCCTGCTCA ACGACGACCG CGAACGGTCT GGGCAGCGTT CGATCGCGCA GAAGGCCAAT
CAGGCCGTGA GCGCGCTGTG GCTCGAACAC GCGTGGCGCA AGGACCAGAT TCTCGAAGCC
TATCTGAACC TCGTGCCGTT TCGCGGCGAG ACGATCGGCC TGTCGGCGCT GTCGATCACG
CTGTTCGGCA AGGCGCCATC CGGTCTCGAC GAGCGCGAGG CCGCCATCGC CGCCGCGTTG
ATCCGTGCGC CGAATGCGTC GTACGCGAAG GTCGGCGAGC GCGCGTGCCG GATCCTGCGC
GACATGCAGG CACCCGAACG CTGTGCCCGT CTCGCCGCTT TCGTTCAGCT CGCGTTCGCG
CGCCCTGCTC CCGTGCTGCT GTCCGTCTCC CCCGATGCGC CGATTCTCGC GCCGCACCTC
GCGCGCCGCA TCGCGAGCGA AACGCATCCC GTAGCGGGCG CGCGCGTGAC CAGCACGCTC
GACGCGAAGC TGCAGCGTTT CGCCAGCGAC ACGCTCACGC GCACGCTCGT CGAACTCAAT
GCGCCCGCGC ATCCGCGCAA TGTCCACGAC GGCGCCATCG TCGTGCTCGA CAATGCGACG
GGCGAAGTAC TCGCATGGGT CGGCTCGTCG GGCGCGCTGT CGGACGCGCG CGATGTCGAT
GCCGTGCTCG CGCGCCGCCA GGCCGGATCG ACGCTCAAGC CGTTCCTGTA TGCGCAGGCC
ATCGACGAAC GGCGGCTCAC CACGGCGTCG CTGCTCGACG ACGCGCCGCT CGATCTTCCG
GCAGGCGGCG GCCTCTACAT ACCGCAGAAC TACGACAAGG ACTTCAAGGG CTGGGTGAGC
GTGCGCACAG CGCTTGGCTC GTCGCTGAAC GTGCCCGCCG TGCGCACGCT GGTGATGCTC
ACGCCGCACC GCTTCGCGAA AACGTTGACC GCGCTCGGCT TGCCGCTCGA CCAAAGCGGA
GACTACTACG GCTATTCGCT CGCGTTAGGC AGCGCGGACG TGACCCTGCT GTCGCTGACC
AATGCGTATC GCGCGCTGGC AAATGGCGGC GTCGCCGCGC CGACCGTCGA TGTCGTGCGA
CGCCCGCTCT CGCCTGCGGC ACAGCAACGC GTGTTCAGCA GCGATGCGAG CTACATCATC
GCGACAGTGC TGTCGGACAA CAACGCGCGC ACGCGCACGT TCGGCTTCGA CAGCCCGCTC
GCGACGCGCT TTTTCTCGGC AGTGAAGACG GGCACCAGCA AGGATATGCG CGACAACTGG
ACGGTCGGCT ATACGTCGCG CTACACGGTC GGCGTGTGGG TCGGCAACGC GGACGGCCAG
CCGATGTGGG ACGTGTCCGG CGTCACGGGC GCCGCGCCCA TCTGGGCGGC CGTCGTCGGT
TATCTGCACC GGCGCGTGCC GAGCGTCGCG CCGCGCGCGC CTGCGGGCGT CGTGCAAACG
CGCGTCACCT TCGACGGCAA TATCGAGCCC GCACGCAACG AGTGGTTTGT CAGCGGCACC
CAAACGCCTA TCGTGGGGCT TGCCGCGAAT GCCGGGCCGG CGGATCGCGC GCCCGCCGTC
TCACGCGTAA CAACGCCAGG GCGGGCGATG TCATCGGCAA ACGCCGCACC GCGCATCGCT
TCCCCCACGG ACGGCACGCT GTTCGCGCTC GATCCCGACA TCCCCGCCGC GCGCCAGCGC
ATCGTGTTCG AGCGCGCGAG CGGCTCGTCC TCGCGCAGCC GCTGGCGACT CGACGGCAAG
CCGCTCGGCG GCGACGAGCG CGTGCTGTGG CTGCCGTGGC CCGGGCGCCA TGTGCTCGAA
CTCGTCGACG CGGACGGCAT GAGCGCCGAT TCGGTGCATT TCGACGTCCG CGGTGCGACG
GCGCGCGAGA CCGCGTTGCC GGGCGGTACG AAATCCGACA CACCGCACCA CGGCGTCACG
CCATCCAACG CCCGCTGA
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| Protein sequence | MRASTKAMNC DAPLARRGFV AFVRIVRIVL CILWVGEPLA AHALPTFDDV RTQWRSSDWL
LLSRDGVPLQ RTRIDRTERR GDWVALADVS PALREAIVVS EDKRFYEHSG VDWRGAAAAA
WANLWNTRTR GASTVTMQLT GLLNDDRERS GQRSIAQKAN QAVSALWLEH AWRKDQILEA
YLNLVPFRGE TIGLSALSIT LFGKAPSGLD EREAAIAAAL IRAPNASYAK VGERACRILR
DMQAPERCAR LAAFVQLAFA RPAPVLLSVS PDAPILAPHL ARRIASETHP VAGARVTSTL
DAKLQRFASD TLTRTLVELN APAHPRNVHD GAIVVLDNAT GEVLAWVGSS GALSDARDVD
AVLARRQAGS TLKPFLYAQA IDERRLTTAS LLDDAPLDLP AGGGLYIPQN YDKDFKGWVS
VRTALGSSLN VPAVRTLVML TPHRFAKTLT ALGLPLDQSG DYYGYSLALG SADVTLLSLT
NAYRALANGG VAAPTVDVVR RPLSPAAQQR VFSSDASYII ATVLSDNNAR TRTFGFDSPL
ATRFFSAVKT GTSKDMRDNW TVGYTSRYTV GVWVGNADGQ PMWDVSGVTG AAPIWAAVVG
YLHRRVPSVA PRAPAGVVQT RVTFDGNIEP ARNEWFVSGT QTPIVGLAAN AGPADRAPAV
SRVTTPGRAM SSANAAPRIA SPTDGTLFAL DPDIPAARQR IVFERASGSS SRSRWRLDGK
PLGGDERVLW LPWPGRHVLE LVDADGMSAD SVHFDVRGAT ARETALPGGT KSDTPHHGVT
PSNAR
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