Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0556 |
Symbol | |
ID | 6242057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 629524 |
End bp | 630423 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642592320 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001856794 |
Protein GI | 186475324 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.530376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0228054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA GCACCTCTTC GACGCCGCCA ACACCGCAGA CGCCAGCCGC CCCGTCGACG CCGCGCGCGC GCGATAGCCG CCATGACGTG CTGCGCGCCT TGATGCGCTC GCCCACATTC GTCGTCGGCG CGCTGATCGT GCTGTGGTGG ATCGTGTGCG CGATTGCCGG CGTGTGGGTC GCGCCGCTCG ATCCGTATGC ATCCGATCCG TTGAACTCGC TCACGCCGCC AGCACACGGG CACTGGTTCG GCACCGATCA ACTAGGCCGC GACGTACTCT CGCGCGTGAT CGTCGGTGCG CGCGACATTC TGACGATCGC CCCGCTCGCG ACGCTGCTCG GCACGCTCGC GGGCACGGCG CTCGGCCTCG TGGTCGGCTA CTTCGACGGC TGGGTCGACA ACGTGGTCGG ACGCGCGATC GATGCCGTGC TCGCGCTGCC TCTCGTGATC GTCGCGCTGC TCGCCCTCGC CGCGGTGGGC GCTTCGAACT TCACCGTGAT CCTCGTGATC GGCATCACGT TCACGCCGAT CACGGCGCGC ACGGTGCGCG CCGCCGTGTT CGCCGAACGG CATCTCGACT ATGTGGCCGC TGCGCAATTG CGCGGCGAGA ACGCGTTCTA CATCATGTTC GCCGAGATCC TGCCGAACGT GCTGCCGCCC ATCATCGTCG AAGCGACGGT GCGGCTCGGC TACGCGATCT TCGCCGTCGC GACACTGTCC TTTCTCGGCT TCGGCATCCA GCCGCCTTCC GCCGACTGGG GGCTCGCGCT CTCCGAGTCA TACACGCTGA TGGCGGGCGG CGCGTGGTGG ACGGTCGTGT TCGATGCCGC CGCCATTGCC TCGCTGGTGG TCGGCGTGAA CCTGATCGCG GATGCCGTGC AAGGAGCCGT CGACGTATGA
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Protein sequence | MSASTSSTPP TPQTPAAPST PRARDSRHDV LRALMRSPTF VVGALIVLWW IVCAIAGVWV APLDPYASDP LNSLTPPAHG HWFGTDQLGR DVLSRVIVGA RDILTIAPLA TLLGTLAGTA LGLVVGYFDG WVDNVVGRAI DAVLALPLVI VALLALAAVG ASNFTVILVI GITFTPITAR TVRAAVFAER HLDYVAAAQL RGENAFYIMF AEILPNVLPP IIVEATVRLG YAIFAVATLS FLGFGIQPPS ADWGLALSES YTLMAGGAWW TVVFDAAAIA SLVVGVNLIA DAVQGAVDV
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