| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0023 |
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| Symbol | |
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| ID | 6241527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 25363 |
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| End bp | 28020 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642591784 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001856264 |
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| Protein GI | 186474794 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATGGC TTGACCAACC CCGCACGCTG GAGATCGTCA GCGCAGGCCT GCCGAAGTGG
CAGGACGAAT GCCTGTTCAC CGTATCGCGC CTGACCGGCA CCGAAAAGCT CGGCAGGCTC
TACGACTACA CCGTCGAGAT TGCGACGAAG GACGATATCG GCCTGACCGT GCATGAGGCA
AGAGCCATGG TCAAGGTGGA CGAACTGGTC GGCAAGCAGG TGACGGTGAA GATCGCCACC
GAGGGTAGCG GCACCTACGA GACGGGAACA ATCGGCGTGT CCCCGTCGAT CAATATCGGC
GCAGGCGTGC GCGAGATCAC CGGCCTGATC GTCTCGGCAG AGTGCGTCGG CTCGGATACG
CGGCGGGCGT TCTATCGCTT GAGGATTCGC CCATGGCTCT TTTTAGCGAC CCTCAACCAG
GACTCAAGAA TCTTCCAGGA CCTCACGGTC AAGGAAATCT CCGAAACGAT CCTGAAAAAG
TATCCGTTTC ACTATGAACT GCGCCTGGCC GGCCCCGGCT TTGGCCGGCA GTATCCGAAG
CGCGACTACC AGCGCATGTA CTGGGAGAGC GACTGGGGCT ATCTCAATCG CCTGTGGCAG
GAATGGGGCA TCACGTTCTT CTACGATGGC CCGACGCTCG TGCTGTGCGA TTCGACCGCC
GCCTACAAGA AGCACGGCCC CGCGTATGCA ACGCTGCAAT ACCAGGACCG CGACGGCCAG
CGCATTGACG AGGAACACGT CCACCAGTTC GAGATTGCGC GCGCCCTGAC CACGGGCAAG
GTCAGCGTCA CCGACTACGA CTACACGCAG TCGCGCGCGA ATCTCGCCGC GAAGGATTCG
GACTACCGCG AGCGCGCGAA CGACAACATC GAGCACTACG CCTGGGGCGA CTACTCGCAG
CCGCTGGCCG GGGCGATGGG GACCGCCGCG CAGCCCAATG AGGTGGACTT CGAGGGCGAG
CACCTGGCAC GCGTGCGGCT GGAAGCAAAA CGGGCGAAGA GTCTGCGCGG CAAGGGGCGC
GGCAACATGC GCGGGCTGAG GGTGGGCTAC ACGTTCCACC TGGAAGGCTA TCCGCTCGCA
CCGGGCAATG GCGAATACCT GGTCGTCGCG ACGAAGATCG AGATCGTCAA CAACGACACG
GTGACGAACC GGGGTGCGCT GCAACGTCAG TACACGTGCG ACACGCAGTT CACGGTGCAG
CCCGCCAATA CGTATTTCCG CACGCCGCAG AAGGCGAAAA AACCGCGCTC GCACGGCGAG
GTGGCGATTG TGACGGGCTA TTCGGATTCA AAAATCTGGA CCGACAGGTA TGGCCGCGCG
AAGGTCTGGT TCCCGTGGGA TCGCGAGGGC CAGCAGGACC AGGACTCAAG CTGCTGGGTG
CGGGTGTCGT CGCCATGGCA GGGTGCGAAC TACGGCGCGA TCTACATTCC GCGCGCGGGC
CACGAGGTGG TGATCGGGTA TCAGGACAAT GATCCGGACA AGCCGTATAT CGCGGGACGG
CACGTGAACC AGTTCCACGA ACCGCCGTGG CCGCTGCCCG CGAACCAGGC GCTTTCGGGC
TGGCTGAGCG AGGACCTGGA GGGGCCAACG ACCAACAGCG TTGTCACCGA CGATACACCG
GGCAAGCTCC AGGTGCAGGT GGCAAGCGAC CACGCGCAGT CGCGTCTGGT GCTGGGCAGC
AACACGCGCA TCGACCGGCA CCAGGGCCGC AGCGAGGCAC GTGGCGAGGG GTTCGAACTG
GCGACCGAGG CGCATGGCGT GGCGCGCGCC AATCGGGGTC TGCTGCTGAC GACCGAGACG
CGCGCTGGCG CGGGTGCGCC CGTAAAGGAC ATGGGCGAGA CGGTGCAGCG GCTCACGCAG
GCGCGCGAAC TGCACGAGGA CATGGCGCAG TTCGCCAGGC GGCACAAGGC GCAGGACGCG
CAGGTGAGCC AGGGCGACGC AACGGCGGGC ATGAAGGCGC AGAACGACGC GATCAAGGGC
GGCGCGAAAA GCACCGCGAA CCCGTCGCCG GAGATGACGC GGCCCGACCT CGTGCTGGCA
AGTGCGGCGG GTATCGCAGT GACCGCCAGC GACAGCACGC ATCTGCACAG CCAGAACGAT
CACGCGATTA CGGCGGGCCG CGACGTGAGC ATTGCGTCGG GCCGCTCGTG GCTGGCGTCG
GTGCGGGGTG CCCTCTCGTT CGTGACAGGG CTTGGCATCC GCCTGTTCGC GGCGAAAGGC
AAGGTCGAGA TTCAGGCGCA GAGTGACGCA ATGGCGCTCG GGGCCCTGAA GGACCTCACG
ATCAGCAGCA CGAACGGAAG GATCATTATC ACCGCCGCGA AGGAAATCTG GATTGGTGCG
GGTGGCTCGT ATATCCAGAT CAACGGTAGC GGCATCGTCA ACGGTTCGCC GGGACCGATT
CTGGAAAAGA CGTCCAAATG GAGCAAATCG GGAGTGGATT CGATGAAGAT GCGGCTGCTC
GCGATGCCGA CCTCAGAAAG CGGATTTGAT GATCGATTTC AATTGATCGA CCAGAAGACA
AAAACACCGC TCGCCAATGT TGAATATGCG ATTGTTCGCT CTGATGGGGC GATTGAGCAT
GGTGTAACCG ATGAGCAAGG GCATACGCAT TTACTGAGCC AGACTGCCAC GTCGGAATCG
GTGGCAATTT ACGCGTAA
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| Protein sequence | MSWLDQPRTL EIVSAGLPKW QDECLFTVSR LTGTEKLGRL YDYTVEIATK DDIGLTVHEA
RAMVKVDELV GKQVTVKIAT EGSGTYETGT IGVSPSINIG AGVREITGLI VSAECVGSDT
RRAFYRLRIR PWLFLATLNQ DSRIFQDLTV KEISETILKK YPFHYELRLA GPGFGRQYPK
RDYQRMYWES DWGYLNRLWQ EWGITFFYDG PTLVLCDSTA AYKKHGPAYA TLQYQDRDGQ
RIDEEHVHQF EIARALTTGK VSVTDYDYTQ SRANLAAKDS DYRERANDNI EHYAWGDYSQ
PLAGAMGTAA QPNEVDFEGE HLARVRLEAK RAKSLRGKGR GNMRGLRVGY TFHLEGYPLA
PGNGEYLVVA TKIEIVNNDT VTNRGALQRQ YTCDTQFTVQ PANTYFRTPQ KAKKPRSHGE
VAIVTGYSDS KIWTDRYGRA KVWFPWDREG QQDQDSSCWV RVSSPWQGAN YGAIYIPRAG
HEVVIGYQDN DPDKPYIAGR HVNQFHEPPW PLPANQALSG WLSEDLEGPT TNSVVTDDTP
GKLQVQVASD HAQSRLVLGS NTRIDRHQGR SEARGEGFEL ATEAHGVARA NRGLLLTTET
RAGAGAPVKD MGETVQRLTQ ARELHEDMAQ FARRHKAQDA QVSQGDATAG MKAQNDAIKG
GAKSTANPSP EMTRPDLVLA SAAGIAVTAS DSTHLHSQND HAITAGRDVS IASGRSWLAS
VRGALSFVTG LGIRLFAAKG KVEIQAQSDA MALGALKDLT ISSTNGRIII TAAKEIWIGA
GGSYIQINGS GIVNGSPGPI LEKTSKWSKS GVDSMKMRLL AMPTSESGFD DRFQLIDQKT
KTPLANVEYA IVRSDGAIEH GVTDEQGHTH LLSQTATSES VAIYA
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