Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_2354 |
Symbol | |
ID | 5766280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010084 |
Strand | + |
Start bp | 2563885 |
End bp | 2564613 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641314798 |
Product | conjugal transfer protein TrbJ |
Protein accession | YP_001580536 |
Protein GI | 161525524 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00542986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.35114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATTC GCCTTCTCAC TCTCACTGTT GCTGCGTTGA TCGGTGTCAT GCCCGCTGCG CAGGCGCAGT GGGTTGTCGT TGATCCGACC AACCTCGTGC AGAACACGCT GACCGCCATT CGCACGATGG AGCAGATCAA CAACCAGATC AATCAACTGC AAAACGAGGC GCAGATGTTG ATAAACCAGG CCCGCAATCT GGCGAGCCTC GATTTCAACA TCGTCAACCG CCTGCGCTCC ACGCTCGCCA CCACCGAACG CCTGATCGCC GAGGCGCAGG GACTGGCCTA CGACGTGCAG AGCATGGATG CCACGTTTGC CCGTCTGTAC CCGGAGCAGT ACGCCGCGAC CATTAGCGGC GACCGCATGG CGCAGGACGC CCGCGAACGC TGGAAGAACA CGCTCGATGG CTTGCATACC GCGATGCGGA TGCAGGCACA GGTGTCGCAG AACCTGGCCC AAGACGAAAG CGCGCTGGCC GACCTCGTGA GCCAAAGCCA GTCGGCCACC GGCGCCCTGC AGGCGCAGCA GGCGACCAAC CAGCTTCTGG CCTTGCAGGC CAAGCAGTCG ATCCAGTCCC AGCAGCTCCA GATCACGCAA GACCGGGCGG CCTCGCTGGA ACTGGCGCGG CAGGCGGCGG CGACCGAGCG CGCCCGCGAA GTGCGGCGGC GCTTCCTCGG CAGCGGCACG CCGTACACGC CGCAGTCCGT CAATTTCTAC AACAACTGA
|
Protein sequence | MKIRLLTLTV AALIGVMPAA QAQWVVVDPT NLVQNTLTAI RTMEQINNQI NQLQNEAQML INQARNLASL DFNIVNRLRS TLATTERLIA EAQGLAYDVQ SMDATFARLY PEQYAATISG DRMAQDARER WKNTLDGLHT AMRMQAQVSQ NLAQDESALA DLVSQSQSAT GALQAQQATN QLLALQAKQS IQSQQLQITQ DRAASLELAR QAAATERARE VRRRFLGSGT PYTPQSVNFY NN
|
| |