Gene Bind_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1513 
Symbol 
ID6198162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1712896 
End bp1714068 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content64% 
IMG OID641705502 
Productmajor facilitator transporter 
Protein accessionYP_001832635 
Protein GI182678489 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.592382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCT CCCTTATCGG CACCTTGCGC CTCGTCTCGG TCGTGGCCTT CACCTTCCTC 
GGCTTTCTGG CTGTCGGATT GCCCCTGGCC GTGCTGCCGA CCTATGTCGA TCGTAATCTC
GGTCTCGGCG CTTTCTGGGC GGGCCTCGCG GTTTCGACGC TCTATATCTC GACCATTGCG
AGCCGCACGC ACATCGGGCA AATGACCGAT CGCTTCGGGC CCAAACCCGC CGTCATCATC
GGATTTCTTG CTTATGTTGT CGGGGGTCTT CTCACCGCGG CTTCGGTTCC CACGCAATCT
CTGCCGGTTT TAAGCCTCTG CCTGCTGCTC GCCGGCCGGC TCGCTCTCGG CATCGGCGAG
AGTGCCGTCA GCACCGGCGC GATTTCCTGG GCCATGGCCT TGTTCGGAGC CAAGGAGACC
GTCCGGATCA TCGCCTGGAA CGGCATCGCG ACCAATGCCT CGCTGGCGGC GGCGGCACCG
ATCGGCGCCT GGATCGCCAG CCGCTATGGT TTCGTGGCGA TCGGCCTTGT CACCGTGGCG
GTGGCTCTTC TTGGTTTGAT CCTGGGCCTT GCCCGCCCGA CAGTGGAGAT CAAGGTCGGC
GCCGGCATGG GCGCTGGCCA TGTGTTCAAA ATCATTGCCC CCTATGGCTT CACTCTGGCA
CTCGCGGGCG CCGGATTCGG CGTCATCATG ACGTTCATCG TCCTCTATTT CGAGAGCCGC
GACTGGCCAC ATGCGCCGCT GGCGCTCACC ACGTTCAGCG TGGCCTTCAT GAGCCTGCGT
TTCTTTCTCG CCCGCGCCGT CACGCGTTTC GGCGGTGTTC CGGTAGCACG TGTGGCCTTG
TTTCTCGAAC TCGGCGGCTT CATCTTGCTC ATCGTCGCCG CCGGCCCCGC AATGGCGATC
CTCGGCACCG CGCTCGCTGG TTTCGGCTAT GCGGCGATCT TTCCCTCGCT GGGCGGCGAG
GCGATCGGCC GCGCGCCGCC GCAAAATCGG GGCGTGGCGC TCGGCCTCTA TTCGATGTTT
CAGGACGTCT CTCTGGGCGC CACCGGCCCG GCGGCCGGTA TATTGGCGAC GCATTACGGC
TATGCCTCGC CCTTCTATCT CGGAATCATG GCCATTGCTT TGGGCCTGGT CGTCAGTTTC
GGTCTCGATC CGAGAAAATC AACACAGGCC TGA
 
Protein sequence
MSPSLIGTLR LVSVVAFTFL GFLAVGLPLA VLPTYVDRNL GLGAFWAGLA VSTLYISTIA 
SRTHIGQMTD RFGPKPAVII GFLAYVVGGL LTAASVPTQS LPVLSLCLLL AGRLALGIGE
SAVSTGAISW AMALFGAKET VRIIAWNGIA TNASLAAAAP IGAWIASRYG FVAIGLVTVA
VALLGLILGL ARPTVEIKVG AGMGAGHVFK IIAPYGFTLA LAGAGFGVIM TFIVLYFESR
DWPHAPLALT TFSVAFMSLR FFLARAVTRF GGVPVARVAL FLELGGFILL IVAAGPAMAI
LGTALAGFGY AAIFPSLGGE AIGRAPPQNR GVALGLYSMF QDVSLGATGP AAGILATHYG
YASPFYLGIM AIALGLVVSF GLDPRKSTQA