Gene Bfae_01020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_01020 
Symbol 
ID8398652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp106883 
End bp107959 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content70% 
IMG OID644996198 
Productmonosaccharide ABC transporter membrane protein 
Protein accessionYP_003153574 
Protein GI257067319 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG ACAGCACCTC TCGCACGTCG ATGCTGATCG CCTTGATCCG TCGGCCGTAC 
TTCTGGGGGA TCATCGCGAT CGCCCTGCTG CTGGCCGTCA ACAGCCTCAA GGACCCCGGC
TATCTGGCGA TCAGCTACAA CGAGACCACC GGCAGCCTGG TGGGCAACGT GATCGACATC
CTGCGCGCCG CCGCCCCCAT CGCGATGATC TCGGTGGGGA TGTGCCTGGT CATCGCGACC
GCCGGCATCG ACCTGTCCGT CGGCTCCCTG ATGGCCGTCG CCGGAGCCAT CGCCATGGAG
TTCCTCTCCT CGGCGGGCGG CTCGGCCGGA GCGGCCTTCG CCGCGCTGGG CCTGGCGCTC
CTGCTGGGTG CCGTCCTCGG CGCCGTGAAC GCGGTGCTCA TCTCCGTGGT GGGCCTGCAG
CCGTTCATCT CGACGCTCGT GCTCATGCTC GCCGGTCGCG GGCTCGCGAA GGTGATCACC
GGCGGGCAGA ACACCGCAGC GAGCAACGAC ACCTTCCGCT GGATCGCCAA CGGGTACGTG
CTCGGCCTGC CGGTCGTGTT CCTCCTCGCG GTGCTCATCG TGATCGCGGT CGGGCTGCTG
GTGCGCCGCA GCGCCCTGGG CCTGATGATC GAGGCGGTCG GCATGGACCC GCGGGCGGCC
CGCCTGGCCG GTGTGAACCG GCGCGGACTC CTGTTCGCCG TCTACATCGC CTCCGGGGCG
CTGGCCGCCG TCGCGGGCGT CTTCGCCACC GCGAGCGTGA TGACCGTCGA CGTCTCGAAC
ACCGGCTACC AGCTGGAAAT GGATGCGATC CTCGCCGTCG TCATCGGGGG CACCTCGCTC
GCCGGCGGGA AGTTCAACAT CACCGGCGCG GCGATCGGCG CCCTGCTCAT CGCCACCCTC
GACAAGACCG TCGTGTTCCT GGGGATCTCC TCCTCTGCCA CGCCGGCGTT CAAGGCCATC
GTCATCATCG CCCTGTGCCT GCTGCAGTCC GAGCGGGTCC GGGCGCTGTT CCGGGCACGG
CGCGCGAAGG CCGGCTCCGC CACGCACGAC GCACCGAAGG AGGCTGTCGC AGCATGA
 
Protein sequence
MSSDSTSRTS MLIALIRRPY FWGIIAIALL LAVNSLKDPG YLAISYNETT GSLVGNVIDI 
LRAAAPIAMI SVGMCLVIAT AGIDLSVGSL MAVAGAIAME FLSSAGGSAG AAFAALGLAL
LLGAVLGAVN AVLISVVGLQ PFISTLVLML AGRGLAKVIT GGQNTAASND TFRWIANGYV
LGLPVVFLLA VLIVIAVGLL VRRSALGLMI EAVGMDPRAA RLAGVNRRGL LFAVYIASGA
LAAVAGVFAT ASVMTVDVSN TGYQLEMDAI LAVVIGGTSL AGGKFNITGA AIGALLIATL
DKTVVFLGIS SSATPAFKAI VIIALCLLQS ERVRALFRAR RAKAGSATHD APKEAVAA