Gene Bcep18194_A6095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6095 
Symbol 
ID3751327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3239649 
End bp3240542 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content75% 
IMG OID637764415 
Productpolysaccharide deacetylase 
Protein accessionYP_370333 
Protein GI78067564 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.233371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.603331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGTCGTCCGT TCCGTCGCGA CAGCCCGGCG ATGCGCGCCG CTGGAAGCCG 
ACGCCGCTGA TCGCGGGCAC GGCCGCGCTG CATGCGGGCG CGGCCGCCGC CGTCGTCGCG
CAGCCGGCCG CGTGGCCGTG GGCGGTCGGT GGCGTGGTCG CGTCCCATCT TGCGCTGACC
GCCGCCGGCC TGTGGCCGCG CAGCACGCTG CTCGGCCCGA ACTGGACGCA CCTGCCACCG
GGTGCGGGCC GCCGCATCGC GCTGACGATC GACGACGGCC CGGACCCGGA CGTCACGCCG
CGCGTGCTCG ACCTGCTCGA CCGTTACGAT GCGCGCGCGA CGTTCTTCTG CATCGGCGAT
CTCGCGCGCC GTCATCCGCG CTGGATCGAG GCGATCGTCG CGCGCGGTCA CGCGATCGAA
AACCACAGCC AGCGGCACCG GCACACATTC TCGCTGTCGG GGCCCGCCGC GCTGCGGCGC
GAGATCGCGG CCGCGCAGCA GACGCTGACC GAGCTCACCG GCACGCGCCC GCTGTTCTTC
CGCGCGCCGG CCGGCCTGCG CAACCCGTTT CTCGAACCGG TGCTGTGCGA ACTCGGCCTG
CAGCTGGCCA GCTGGACGCG GCGCGGTTTC GACACGCGCG CACGCGATGC CGCGACCGTC
ACGCGCCGCC TGCTGCACGG TCTCGCGGCA CGCGACATCC TGCTCGTGCA CGACGGCCAT
GCGGCGCGTG ACGCGCGCGG TGAACCGGTC GTGCTCGACG TGCTGCAGGC GGTGCTGCGC
GCGGCCGTCG ATGCGCAACT GCACTGGACC ACGCTGCGCG CGGCGCTCGC GCCGGAACCG
CCCGGCGGGC CGGCCGAGCC GGCCGGCTCG GCCCACCCGT TTGATAAAAT CTGA
 
Protein sequence
MSAPSSVPSR QPGDARRWKP TPLIAGTAAL HAGAAAAVVA QPAAWPWAVG GVVASHLALT 
AAGLWPRSTL LGPNWTHLPP GAGRRIALTI DDGPDPDVTP RVLDLLDRYD ARATFFCIGD
LARRHPRWIE AIVARGHAIE NHSQRHRHTF SLSGPAALRR EIAAAQQTLT ELTGTRPLFF
RAPAGLRNPF LEPVLCELGL QLASWTRRGF DTRARDAATV TRRLLHGLAA RDILLVHDGH
AARDARGEPV VLDVLQAVLR AAVDAQLHWT TLRAALAPEP PGGPAEPAGS AHPFDKI