| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3401 |
|---|
| Symbol | |
|---|
| ID | 3748569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 259660 |
|---|
| End bp | 260814 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637761666 |
|---|
| Product | ABC efflux pump, inner membrane subunit |
|---|
| Protein accession | YP_367647 |
|---|
| Protein GI | 78064878 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.017791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.724551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGTGC TGAAGCTGAT CGCGCGCAAC GCGCTGCGGC ACCGGCTGCG CACGCTGCTG
ACCGTGCTCG GGCTCACCAT CGCCGTGCTC GCGTTCGGGC TGCTGCACAC CGTGGTCGAC
GCGTGGTACG CGGGCGCCGC CGCCGCGTCC AGCGGGCGGC TCGTCACGCG CAACGCGATC
TCGCTCGTGT TTCCGCTGCC CGTGAGCTAC GAGAACCGGA TTCGCGGCGT CGACGGCGTG
ACGGCCGTGG TTCGCTCGAA CTGGTTCGGC GGCATCTACC GCGATCCGAA GAACTTCTTC
GCGAGCTTCG CGGTATCGGA CAACTATCTC GACCTGTACC CGGAATACAT CGTCCCGGAC
CAGCAGCGCG CCGACTACAA CCGCGACCGG CGCGGCTGCC TCGTCGGGCG CCAGCTCGCG
ACGCAATTCG GCTTCAAGAT CGGCGACGTG ATCCCGCTGA AGGGGACGAT CTATCCGGGC
ACGTGGGATT TCGTCGTGCG CGGGATCTTC GACGGCCGCG ACGACTCGAC GATCACGCGC
CAGCTGGTAT TCCACTGGGA CTACCTGAAC GAGACGGTGC GCCAGCGCAC GCCGAAGCAG
GCCGACCAGG TCGGCGTATT CGTGCTCGGC GTCGCGAACC CCGACGACGG CGCGTCGATC
GCGCGCAACG TCGACGCGGT GTTCAAGAAC TCGCTCGCCG AGACGCTGAC CGAGACCGAG
CAGGCGTTCC AGCTCGGCTT CGTCGCGATG TCGAACCAGA TCATCGCGGC GATCCGCGTC
GTGTCGTACG TGGTGATCCT GATCATCATG GCCGTGATGG CCAACGCGAT GGCGATGAGC
GCGCGCGAAC GCACGGCCGA ATACGCGACG CTGAAGGCGC TCGGTTTCGG CCCCGGCTTT
CTCGCGCTGA TCGTGTTCGG CGAATCGGTC GTGATCGCGG TGGCCGGCGG CGGGCTCGGG
ATCCTCGCGA CGCCGCCCGC CGCGAGCCTG TTCAAGCAGG CGGCAGGCGG CATCTTCCCG
GTGTTCAAGG TGTCGACCGA GACGGTCGTG CTGCAGGCCG CGTGCTCGGT CGCGGTCGGC
TTCGCGGCGG CGATCGTGCC GGCGTGGCAG GCGGCGCGCG TGCGCGTGGT CGAAGGCCTC
AGGGCAATCG GTTAG
|
|---|
| Protein sequence | MYVLKLIARN ALRHRLRTLL TVLGLTIAVL AFGLLHTVVD AWYAGAAAAS SGRLVTRNAI
SLVFPLPVSY ENRIRGVDGV TAVVRSNWFG GIYRDPKNFF ASFAVSDNYL DLYPEYIVPD
QQRADYNRDR RGCLVGRQLA TQFGFKIGDV IPLKGTIYPG TWDFVVRGIF DGRDDSTITR
QLVFHWDYLN ETVRQRTPKQ ADQVGVFVLG VANPDDGASI ARNVDAVFKN SLAETLTETE
QAFQLGFVAM SNQIIAAIRV VSYVVILIIM AVMANAMAMS ARERTAEYAT LKALGFGPGF
LALIVFGESV VIAVAGGGLG ILATPPAASL FKQAAGGIFP VFKVSTETVV LQAACSVAVG
FAAAIVPAWQ AARVRVVEGL RAIG
|
|---|
| |