Gene Bcenmc03_6466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6466 
Symbol 
ID6125389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp509182 
End bp509916 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID641647479 
Productextracellular solute-binding protein 
Protein accessionYP_001774076 
Protein GI170734962 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.59873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0219509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG CTCCTGCTGT CGTCTCCGCC TTCACGCCCA CCGGCAAGGT CCGCGCATCG 
ATCAACCTCG GCAACCCGAT CCTCGCGAAC CGCGACCCGG CAACGGGCGA GCCGTTCGGC
GTATCGATCG ACCTCGCCCG TGCCTTCGCC GAGCGCCTGT CGGCCGATCT GGAACTCGTC
GTATTCGACG CCGCCGGCAA ATCGGTGCAG GCACTGAGCG ACGAGCGCGC CGATTTCGGC
TTCTTCGCGG TCGATCCGCT GCGCGGCGAA ACGGTCGCGT TCACCGCGCC GTACGTGCTG
ATCGAAGGCT TCTATCTCGT GCCGGATGCG TCGCCGATCC GTACCAACGC GGACGTCGAC
CAGCCGCATA ACCGCGTGGC CGTCGGCAAG GGCAGCGCGT ACGACCTGTT CCTCACCCGC
GAACTGAAAG CCGCGCAGAT CGTGCGTGCG CCGACGTCGC AGGCCGTCGT GCCGACGTTC
GTCGAACAGA AGCTGGAAGT GGCGGCCGGC GTGAAGCAGC AGCTCGAAAC CGATGCCGCG
AAAACGCAGG GCCTGCGCCT GCTCGACGAG CGCTTCATGG TGATCCGGCA GGCGATGGGC
GTGCCGAAGA GCCGCGGCGA CGCGGCCGCC GCGGCATTGG CCGCGTTCGT CGAGGACATG
AAGGCGTCGG GCTTCGTCGC CGATTCGCTG CGCCGGCACG GCATCACGGG TGCATCGGTC
GCGCCGGCAG GCTGA
 
Protein sequence
MPIAPAVVSA FTPTGKVRAS INLGNPILAN RDPATGEPFG VSIDLARAFA ERLSADLELV 
VFDAAGKSVQ ALSDERADFG FFAVDPLRGE TVAFTAPYVL IEGFYLVPDA SPIRTNADVD
QPHNRVAVGK GSAYDLFLTR ELKAAQIVRA PTSQAVVPTF VEQKLEVAAG VKQQLETDAA
KTQGLRLLDE RFMVIRQAMG VPKSRGDAAA AALAAFVEDM KASGFVADSL RRHGITGASV
APAG